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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Ndc80 complex 1.5327E-14 4 4 4 6292
condensed nuclear chromosome kinetochore 3.2475E-9 4 49 4 6292
condensed chromosome kinetochore 3.2475E-9 4 49 4 6292
condensed chromosome, centromeric region 5.2275E-9 4 55 4 6292
condensed nuclear chromosome, centromeric region 5.2275E-9 4 55 4 6292
kinetochore 7.4742E-9 4 60 4 6292
chromosome, centromeric region 1.1748E-8 4 67 4 6292
condensed nuclear chromosome 3.2549E-8 4 86 4 6292
condensed chromosome 4.6741E-8 4 94 4 6292
nuclear chromosome part 8.0626E-7 4 190 4 6292
nuclear chromosome 1.6808E-6 4 228 4 6292
chromosomal part 1.9643E-6 4 237 4 6292
chromosome 3.5214E-6 4 274 4 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
nuclear part 9.4015E-4 4 1103 4 6292
protein complex 1.0617E-3 4 1137 4 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

microtubule nucleation 1.3572E-10 4 23 4 6292
microtubule cytoskeleton organization 5.3107E-8 4 97 4 6292
microtubule-based process 9.1796E-8 4 111 4 6292
chromosome segregation 1.6351E-7 4 128 4 6292
cytoskeleton organization 1.7716E-6 4 231 4 6292
organelle organization 1.0248E-3 4 1127 4 6292
cellular component organization 3.9851E-3 4 1582 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of cytoskeleton 4.4883E-9 4 53 4 6292
structural molecule activity 8.286E-6 4 339 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle