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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase complex 3.4469E-12 6 6 4 6292
mannosyltransferase complex 3.4469E-12 6 6 4 6292
Golgi cis cisterna 4.8208E-11 6 10 4 6292
Golgi stack 4.1716E-10 6 16 4 6292
Golgi cisterna 4.1716E-10 6 16 4 6292
organelle subcompartment 4.1716E-10 6 16 4 6292
Golgi apparatus part 1.7727E-6 6 119 4 6292
Golgi apparatus 7.5743E-6 6 171 4 6292
organelle part 2.2664E-3 6 2282 6 6292
intracellular organelle part 2.2664E-3 6 2282 6 6292
cytoplasmic part 3.7539E-3 6 2482 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein amino acid glycosylation 2.7442E-7 6 75 4 6292
glycosylation 2.7442E-7 6 75 4 6292
macromolecule glycosylation 2.7442E-7 6 75 4 6292
glycoprotein biosynthetic process 3.7506E-7 6 81 4 6292
glycoprotein metabolic process 4.1404E-7 6 83 4 6292
barrier septum formation 2.2727E-6 6 3 2 6292
negative regulation of proteolysis 4.5436E-6 6 4 2 6292
protein amino acid N-linked glycosylation 8.7346E-6 6 49 3 6292
regulation of proteolysis 2.1167E-5 6 8 2 6292
cellular protein metabolic process 2.4449E-5 6 1074 6 6292
protein metabolic process 3.4263E-5 6 1136 6 6292
cellular carbohydrate metabolic process 4.1266E-5 6 262 4 6292
carbohydrate metabolic process 5.4416E-5 6 281 4 6292
negative regulation of cellular protein metabolic process 7.9142E-5 6 15 2 6292
negative regulation of protein metabolic process 9.041E-5 6 16 2 6292
protein modification process 5.1534E-4 6 499 4 6292
replicative cell aging 5.2472E-4 6 38 2 6292
macromolecule modification 8.5609E-4 6 569 4 6292
cell aging 8.7368E-4 6 49 2 6292
aging 9.4642E-4 6 51 2 6292
regulation of cellular protein metabolic process 1.6787E-3 6 68 2 6292
substituted mannan metabolic process 1.9064E-3 6 2 1 6292
mannan metabolic process 1.9064E-3 6 2 1 6292
hemicellulose metabolic process 1.9064E-3 6 2 1 6292
regulation of protein metabolic process 1.9854E-3 6 74 2 6292
protein folding 2.2036E-3 6 78 2 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
cytokinetic process 3.0534E-3 6 92 2 6292
N-glycan processing 3.8098E-3 6 4 1 6292
cytokinesis 4.4957E-3 6 112 2 6292
cell division 7.4448E-3 6 145 2 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase activity 9.6291E-9 6 6 3 6292
mannosyltransferase activity 2.8093E-8 6 43 4 6292
transferase activity, transferring hexosyl groups 3.5663E-7 6 80 4 6292
transferase activity, transferring glycosyl groups 1.0304E-6 6 104 4 6292
transferase activity 3.1028E-3 6 797 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle