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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA helicase complex 5.6308E-15 5 11 5 6292
Ino80 complex 5.6308E-15 5 11 5 6292
nuclear chromatin 1.8307E-10 5 73 5 6292
chromatin 2.4081E-10 5 77 5 6292
chromatin remodeling complex 8.7172E-10 5 99 5 6292
nuclear chromosome part 2.3849E-8 5 190 5 6292
nuclear chromosome 5.9875E-8 5 228 5 6292
chromosomal part 7.2786E-8 5 237 5 6292
chromosome 1.512E-7 5 274 5 6292
non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
intracellular non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
nuclear part 1.6432E-4 5 1103 5 6292
protein complex 1.913E-4 5 1137 5 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
nucleus 3.5796E-3 5 2041 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292
organelle part 6.2578E-3 5 2282 5 6292
actin filament 7.1338E-3 5 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin modification 2.4026E-6 5 168 4 6292
chromatin organization 5.1306E-6 5 203 4 6292
chromatin remodeling 1.1891E-5 5 68 3 6292
chromosome organization 2.787E-4 5 555 4 6292
vesicle transport along actin filament 1.5888E-3 5 2 1 6292
actin filament-based movement 1.5888E-3 5 2 1 6292
vesicle localization 3.1756E-3 5 4 1 6292
contractile ring contraction involved in cell cycle cytokinesis 3.1756E-3 5 4 1 6292
actin cytoskeleton reorganization 3.9682E-3 5 5 1 6292
actin filament reorganization involved in cell cycle 3.9682E-3 5 5 1 6292
organelle organization 4.3919E-3 5 1127 4 6292
budding cell isotropic bud growth 6.3431E-3 5 8 1 6292
protein secretion 7.1338E-3 5 9 1 6292
establishment of mitotic spindle localization 7.9239E-3 5 10 1 6292
spindle localization 7.9239E-3 5 10 1 6292
establishment of spindle localization 7.9239E-3 5 10 1 6292
establishment of spindle orientation 7.9239E-3 5 10 1 6292
establishment of mitotic spindle orientation 7.9239E-3 5 10 1 6292
DNA repair 8.7174E-3 5 192 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent 5'-3' DNA helicase activity 1.0594E-5 5 7 2 6292
5'-3' DNA helicase activity 1.4121E-5 5 8 2 6292
ATP-dependent DNA helicase activity 7.6913E-5 5 18 2 6292
DNA helicase activity 2.8058E-4 5 34 2 6292
ATP-dependent helicase activity 5.6165E-4 5 48 2 6292
purine NTP-dependent helicase activity 5.6165E-4 5 48 2 6292
DNA-dependent ATPase activity 7.3776E-4 5 55 2 6292
helicase activity 1.6756E-3 5 83 2 6292
ATPase activity, coupled 5.3152E-3 5 149 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle