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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 8.0465E-7 7 211 5 6292
nuclear lumen 3.5214E-5 7 453 5 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
organelle lumen 2.1944E-4 7 660 5 6292
intracellular organelle lumen 2.1944E-4 7 660 5 6292
membrane-enclosed lumen 2.9135E-4 7 700 5 6292
nuclear part 2.5214E-3 7 1103 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 2.7556E-4 7 346 4 6292
ribonucleoprotein complex biogenesis 3.725E-4 7 374 4 6292
GTP biosynthetic process 2.224E-3 7 2 1 6292
cellular component biogenesis 3.9065E-3 7 694 4 6292
regulation of transcription, mating-type specific 5.552E-3 7 5 1 6292
GTP metabolic process 7.7654E-3 7 7 1 6292
rRNA metabolic process 9.1999E-3 7 137 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 1.2524E-5 7 367 5 6292
nucleic acid binding 2.2923E-4 7 666 5 6292
7S RNA binding 1.1125E-3 7 1 1 6292
5S rRNA binding 2.224E-3 7 2 1 6292
IMP dehydrogenase activity 3.3344E-3 7 3 1 6292
binding 5.2851E-3 7 1294 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle