From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 7 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
preribosome, small subunit precursor | 1.5882E-5 | 7 | 6 | 2 | 6292 |
nucleolus | 3.9747E-5 | 7 | 211 | 4 | 6292 |
nuclear outer membrane | 8.2954E-5 | 7 | 86 | 3 | 6292 |
nuclear membrane | 1.1888E-4 | 7 | 97 | 3 | 6292 |
nucleus | 3.7528E-4 | 7 | 2041 | 7 | 6292 |
preribosome | 5.8524E-4 | 7 | 34 | 2 | 6292 |
outer membrane | 7.1655E-4 | 7 | 178 | 3 | 6292 |
organelle outer membrane | 7.1655E-4 | 7 | 178 | 3 | 6292 |
nuclear lumen | 7.7894E-4 | 7 | 453 | 4 | 6292 |
nuclear envelope | 9.9288E-4 | 7 | 199 | 3 | 6292 |
non-membrane-bounded organelle | 1.3072E-3 | 7 | 959 | 5 | 6292 |
intracellular non-membrane-bounded organelle | 1.3072E-3 | 7 | 959 | 5 | 6292 |
nuclear membrane-endoplasmic reticulum network | 1.5515E-3 | 7 | 232 | 3 | 6292 |
organelle lumen | 3.2392E-3 | 7 | 660 | 4 | 6292 |
intracellular organelle lumen | 3.2392E-3 | 7 | 660 | 4 | 6292 |
organelle membrane | 3.8647E-3 | 7 | 692 | 4 | 6292 |
membrane-enclosed lumen | 4.0336E-3 | 7 | 700 | 4 | 6292 |
late endosome membrane | 5.552E-3 | 7 | 5 | 1 | 6292 |
endomembrane system | 7.2588E-3 | 7 | 398 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
rRNA processing | 4.3425E-10 | 7 | 128 | 6 | 6292 |
rRNA metabolic process | 6.572E-10 | 7 | 137 | 6 | 6292 |
ribosome biogenesis | 1.4353E-9 | 7 | 346 | 7 | 6292 |
ribonucleoprotein complex biogenesis | 2.486E-9 | 7 | 374 | 7 | 6292 |
ncRNA processing | 1.0114E-8 | 7 | 215 | 6 | 6292 |
ncRNA metabolic process | 2.9672E-8 | 7 | 257 | 6 | 6292 |
cellular component biogenesis | 1.9331E-7 | 7 | 694 | 7 | 6292 |
RNA processing | 3.1056E-7 | 7 | 380 | 6 | 6292 |
RNA metabolic process | 7.3069E-5 | 7 | 954 | 6 | 6292 |
gene expression | 4.1171E-4 | 7 | 1283 | 6 | 6292 |
nucleic acid metabolic process | 7.2556E-4 | 7 | 1415 | 6 | 6292 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 1.3005E-3 | 7 | 1566 | 6 | 6292 |
maturation of SSU-rRNA | 1.7614E-3 | 7 | 59 | 2 | 6292 |
cellular nitrogen compound metabolic process | 2.6186E-3 | 7 | 1770 | 6 | 6292 |
nitrogen compound metabolic process | 2.8003E-3 | 7 | 1791 | 6 | 6292 |
ribosomal small subunit export from nucleus | 7.7654E-3 | 7 | 7 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.1125E-3 | 7 | 1 | 1 | 6292 |
rRNA (adenine) methyltransferase activity | 1.1125E-3 | 7 | 1 | 1 | 6292 |
nucleocytoplasmic transporter activity | 1.1125E-3 | 7 | 1 | 1 | 6292 |
rRNA methyltransferase activity | 5.552E-3 | 7 | 5 | 1 | 6292 |
ribonucleoprotein binding | 7.7654E-3 | 7 | 7 | 1 | 6292 |