From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 14 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
SAGA complex | 1.8556E-37 | 14 | 22 | 14 | 6292 |
SAGA-type complex | 4.7421E-37 | 14 | 23 | 14 | 6292 |
histone acetyltransferase complex | 6.6709E-32 | 14 | 44 | 14 | 6292 |
SLIK (SAGA-like) complex | 1.044E-28 | 14 | 16 | 11 | 6292 |
nucleoplasm part | 1.28E-20 | 14 | 245 | 14 | 6292 |
nucleoplasm | 3.7444E-20 | 14 | 264 | 14 | 6292 |
nuclear lumen | 8.3271E-17 | 14 | 453 | 14 | 6292 |
organelle lumen | 1.7241E-14 | 14 | 660 | 14 | 6292 |
intracellular organelle lumen | 1.7241E-14 | 14 | 660 | 14 | 6292 |
membrane-enclosed lumen | 3.9609E-14 | 14 | 700 | 14 | 6292 |
nuclear part | 2.4173E-11 | 14 | 1103 | 14 | 6292 |
protein complex | 3.7067E-11 | 14 | 1137 | 14 | 6292 |
Ada2/Gcn5/Ada3 transcription activator complex | 7.6616E-11 | 14 | 5 | 4 | 6292 |
macromolecular complex | 6.1412E-9 | 14 | 1635 | 14 | 6292 |
nucleus | 1.3856E-7 | 14 | 2041 | 14 | 6292 |
organelle part | 6.6422E-7 | 14 | 2282 | 14 | 6292 |
intracellular organelle part | 6.6422E-7 | 14 | 2282 | 14 | 6292 |
transcription factor TFIID complex | 3.9288E-6 | 14 | 15 | 3 | 6292 |
DNA-directed RNA polymerase II, holoenzyme | 2.268E-4 | 14 | 56 | 3 | 6292 |
transcription factor complex | 4.5849E-4 | 14 | 71 | 3 | 6292 |
membrane-bounded organelle | 7.6409E-4 | 14 | 3771 | 14 | 6292 |
intracellular membrane-bounded organelle | 7.6409E-4 | 14 | 3771 | 14 | 6292 |
intracellular organelle | 2.2276E-3 | 14 | 4070 | 14 | 6292 |
organelle | 2.2353E-3 | 14 | 4071 | 14 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
transcription cofactor activity | 8.0248E-13 | 14 | 40 | 7 | 6292 |
transcription factor binding | 1.383E-12 | 14 | 43 | 7 | 6292 |
transcription regulator activity | 1.4954E-10 | 14 | 339 | 10 | 6292 |
transcription coactivator activity | 1.1394E-5 | 14 | 21 | 3 | 6292 |
protein binding | 1.484E-4 | 14 | 612 | 7 | 6292 |
transcription activator activity | 2.9253E-4 | 14 | 61 | 3 | 6292 |
general RNA polymerase II transcription factor activity | 3.3732E-4 | 14 | 64 | 3 | 6292 |
histone acetyltransferase activity | 6.135E-4 | 14 | 17 | 2 | 6292 |
lysine N-acetyltransferase activity | 6.135E-4 | 14 | 17 | 2 | 6292 |
N-acetyltransferase activity | 2.3339E-3 | 14 | 33 | 2 | 6292 |
RNA polymerase II transcription factor activity | 2.6553E-3 | 14 | 130 | 3 | 6292 |
N-acyltransferase activity | 3.0877E-3 | 14 | 38 | 2 | 6292 |
TATA-binding protein binding | 4.4455E-3 | 14 | 2 | 1 | 6292 |
acetyltransferase activity | 5.299E-3 | 14 | 50 | 2 | 6292 |