YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 1.3411E-4 7 101 3 6292
90S preribosome 1.4316E-4 7 17 2 6292
cytosolic part 2.352E-4 7 122 3 6292
preribosome 5.8524E-4 7 34 2 6292
cytosolic small ribosomal subunit 7.3181E-4 7 38 2 6292
ribosomal subunit 7.7712E-4 7 183 3 6292
non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
intracellular non-membrane-bounded organelle 1.3072E-3 7 959 5 6292
small ribosomal subunit 2.6853E-3 7 73 2 6292
cytosol 2.7813E-3 7 284 3 6292
ribosome 2.9533E-3 7 290 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 3.8026E-4 7 376 4 6292
negative regulation of programmed cell death 1.1125E-3 7 1 1 6292
anti-apoptosis 1.1125E-3 7 1 1 6292
negative regulation of cell death 1.1125E-3 7 1 1 6292
negative regulation of apoptosis 1.1125E-3 7 1 1 6292
regulation of programmed cell death 4.4437E-3 7 4 1 6292
regulation of apoptosis 4.4437E-3 7 4 1 6292
regulation of cell death 4.4437E-3 7 4 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.194E-3 7 212 3 6292
nucleic acid binding 3.3506E-3 7 666 4 6292
structural molecule activity 4.6122E-3 7 339 3 6292
binding 5.2851E-3 7 1294 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle