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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

non-membrane-bounded organelle 4.2731E-4 6 959 5 6292
intracellular non-membrane-bounded organelle 4.2731E-4 6 959 5 6292
cytosolic ribosome 3.6696E-3 6 101 2 6292
cytosolic part 5.3155E-3 6 122 2 6292
ribonucleoprotein complex 8.9879E-3 6 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

negative regulation of programmed cell death 9.5359E-4 6 1 1 6292
anti-apoptosis 9.5359E-4 6 1 1 6292
negative regulation of cell death 9.5359E-4 6 1 1 6292
negative regulation of apoptosis 9.5359E-4 6 1 1 6292
gene expression 1.746E-3 6 1283 5 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
ribosome biogenesis 2.9111E-3 6 346 3 6292
ribonucleoprotein complex biogenesis 3.641E-3 6 374 3 6292
translation 3.6971E-3 6 376 3 6292
regulation of programmed cell death 3.8098E-3 6 4 1 6292
regulation of apoptosis 3.8098E-3 6 4 1 6292
regulation of cell death 3.8098E-3 6 4 1 6292
rRNA processing 5.8384E-3 6 128 2 6292
rRNA metabolic process 6.6661E-3 6 137 2 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 7.1765E-5 6 666 5 6292
RNA binding 1.5555E-4 6 367 4 6292
structural constituent of ribosome 6.9964E-4 6 212 3 6292
binding 1.819E-3 6 1294 5 6292
structural molecule activity 2.7446E-3 6 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle