YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 11 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

preribosome 2.31E-5 11 34 3 6292
90S preribosome 3.7257E-4 11 17 2 6292
cytosolic ribosome 6.033E-4 11 101 3 6292
cytosolic part 1.0475E-3 11 122 3 6292
ribonucleoprotein complex 1.088E-3 11 514 5 6292
cytosolic small ribosomal subunit 1.8876E-3 11 38 2 6292
ribosomal subunit 3.3612E-3 11 183 3 6292
small ribosomal subunit 6.8247E-3 11 73 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.1303E-8 11 376 8 6292
gene expression 2.1916E-5 11 1283 9 6292
cellular protein metabolic process 7.1339E-5 11 1074 8 6292
protein metabolic process 1.0851E-4 11 1136 8 6292
cellular biosynthetic process 1.2033E-4 11 1567 9 6292
biosynthetic process 1.4499E-4 11 1602 9 6292
cellular macromolecule biosynthetic process 1.5044E-4 11 1187 8 6292
macromolecule biosynthetic process 1.5233E-4 11 1189 8 6292
ribosomal large subunit assembly 2.1955E-3 11 41 2 6292
primary metabolic process 2.7104E-3 11 2896 10 6292
cellular macromolecule metabolic process 2.7237E-3 11 2285 9 6292
macromolecule metabolic process 3.4003E-3 11 2349 9 6292
GTP biosynthetic process 3.4937E-3 11 2 1 6292
ribosomal subunit assembly 3.9232E-3 11 55 2 6292
cellular metabolic process 4.1594E-3 11 3033 10 6292
ribosome assembly 5.2805E-3 11 64 2 6292
ribosomal large subunit biogenesis 5.443E-3 11 65 2 6292
metabolic process 6.0149E-3 11 3157 10 6292
organelle assembly 6.1157E-3 11 69 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.3154E-8 11 212 7 6292
structural molecule activity 3.3934E-7 11 339 7 6292
RNA binding 2.7066E-3 11 367 4 6292
nucleic acid binding 3.5073E-3 11 666 5 6292
IMP dehydrogenase activity 5.2364E-3 11 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle