| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.633702818176] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin filament | 1.819E-6 | 2 | 9 | 2 | 6292 |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
| myosin V complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| filamentous actin | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| unconventional myosin complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| myosin complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| DNA helicase complex | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| Ino80 complex | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| H4/H2A histone acetyltransferase complex | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| NuA4 histone acetyltransferase complex | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| Swr1 complex | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| calmodulin binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| microfilament motor activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
| motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |