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Protein Overview: LTP1

General Information:
Name(s) found: LTP1 / YPR073C [SGD]
Description(s) found:
Found 36 descriptions.
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  • Protein phosphotyrosine phosphatase of unknown cellular role; activated by adenine [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: protein amino acid dephosphorylation [IDALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IDALink to PubMed articleLink to PubMed article][IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIEKPKISV AFICLGNFCR SPMAEAIFKH EVEKANLENR FNKIDSFGTS NYHVGESPDH  60
   61 RTVSICKQHG VKINHKGKQI KTKHFDEYDY IIGMDESNIN NLKKIQPEGS KAKVCLFGDW 120
  121 NTNDGTVQTI IEDPWYGDIQ DFEYNFKQIT YFSKQFLKKE L

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) LTP1 MOT1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run PGA1 No Comments Hazbun TR, et al. (2003)
    View Run NSE5 No Comments Hazbun TR, et al. (2003)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data LTP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 917.228787 Tyrosine phosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoprotein phosphatase activity
    		•  6.88246946508693 bayes_pls_golite062009
  • phosphatase activity
    		•  6.45415826301085 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  6.24793868976995 bayes_pls_golite062009
  • protein tyrosine phosphatase activity
    		•  5.42677419561083 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  5.27901564747165 bayes_pls_golite062009
  • hydrolase activity
    		•  3.65742648154352 bayes_pls_golite062009
  • catalytic activity
    		•  1.99182579317454 bayes_pls_golite062009
  • binding
    		•  1.7522117458664 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.628751319213679 bayes_pls_golite062009
  • acid phosphatase activity
    		•  0.62303289859123 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.557666750724006 bayes_pls_golite062009
  • DNA binding
    		•  0.357202336581626 bayes_pls_golite062009
  • protein binding
    		•  0.332591807861153 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle