Protein Overview: gi|16758518, gi|...

General Information:
Name(s) found:	gi\|16758518 [NCBI NR] gi\|14669577 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|16758518\|ref\|NP_446153.1\| calcium channel, voltage-dependent, L type, alpha 1F subunit [Rattus norvegicus] [NCBI NR] gi\|14669577\|gb\|AAK71987.1\| alpha 1F calcium channel subunit [Rattus norvegicus] [NCBI NR] calcium channel, voltage-dependent, alpha 1F subunit [HMR_022704-rand.fasta] calcium channel, voltage-dependent, alpha 1F subunit [Rattus norvegicus]gi\|14669577\|gb\|AAK71987.1\| alpha 1F calcium channel subunit [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Alpha 1F calcium channel subunit [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_053701) calcium channel, voltage-dependent, alpha 1F subunit [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] calcium channel, voltage-dependent, alpha 1F subunit [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] alpha 1F calcium channel subunit [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 CALCIUM CHANNEL, VOLTAGE-DEPENDENT, ALPHA 1F SUBUNIT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] calcium channel, voltage-dependent, L type, alpha 1F subunit [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta] Alpha 1F calcium channel subunit OS=Rattus norvegicus GN=Cacna1f [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	1981 amino acids
Gene Ontology:
Cellular Component:	membrane [IDA][IEA] voltage-gated calcium channel complex [UNKNOWN][IEA] integral to membrane [UNKNOWN][IEA] neuronal cell body [IDA] perikaryon [IDA] integral to membrane of membrane fraction [IDA]
Biological Process:	ion transport [IEA] detection of light stimulus involved in visual perception [UNKNOWN] transmembrane transport [IEA] axonogenesis [UNKNOWN] calcium ion transport [IEA] visual perception [UNKNOWN][IEP] neurotransmitter secretion [NAS] cellular calcium ion homeostasis [UNKNOWN] dendrite morphogenesis [UNKNOWN]
Molecular Function:	ion channel activity [IEA] protein binding [UNKNOWN] voltage-gated ion channel activity [IEA] dihydropyridine-sensitive calcium channel activity [UNKNOWN] voltage-gated calcium channel activity [UNKNOWN][IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESEVGKDT TPEPSPANGT GPGPEWGLCP GPPTVGTDTS GASGLGTPRR RTQHNKHKTV  60
   61 VVASAQRSPR ALFCLTLTNP IRRSCISIVE WKPFDILILL TIFANCVALG VYIPFPEDDS 120
  121 NTATHNLEQV EYVFLVIFTV KTVLKIVAYG LVLHPSAYIR NGWNLLDFII VVVGLFSVLL 180
  181 EQGPGRPGDA PHTGGKPGGF DVKALRAFRV LRPLRLVSGV PSLHIVLNSI MKALVPLLHI 240
  241 ALLVLFVIII YAIIGLELFL GRMHKTCYFL GSDMEAEEDP SPCASSGSGR SCTLNQTECR 300
  301 GRWPGPNGGI TNFDNFFFAM LTVFQCITME GWTDVLYWMQ DAMGYELPWV YFVSLVIFGS 360
  361 FFVLNLVLGV LSGEFSKERE KAKARGDFQK LREKQQMEED LRGYLDWITQ AEELDLHDPS 420
  421 VDGNLASLAE EGRAGHRPQL SELTNRRRGR LRWFSHSTRS THSTSSHASL PASDTGSITD 480
  481 TPGDEDEEEG TMASCTLCLN KIMKTKVCRH FRRANRGLRA RCRRAVKSNA CYWAVLLLVF 540
  541 LNTLTIASEH HGQPVWLTQT QEYANKVLLC LFTVEMLLKL YGLGPSVYVA SFFNRFDCFV 600
  601 VCGGILETTL VEVGAMQPLG ISVLRCVRLL RIFKVTRHWA SLSNLVASLL NSMKSIASLL 660
  661 LLLFLFIIIF SLLGMQLFGG KFNFDQTHTK RSTFDTFPQA LLTVFQILTG EDWNVVMYDG 720
  721 IMAYGGPFFP GMLVCVYFII LFICGNYILL NVFLAIAVDN LASGDAGAAK DKGREKSSEG 780
  781 NPPQENKVLV PGGENEDTEG TKSEGAAPGM EEEEEEEEEE EEENGAGHVE LLQEVVPKEK 840
  841 VVPIPEGSAF FCLSQTNPLR KACHTLIHHH VFTSLILVFI ILSSVSLAAE DPIRAHSFRN 900
  901 HILGYFDYAF TSIFTVEILL KMTVFGAFLH QGSFCRSWFN LLDLLVVSVS LISFGIHSSA 960
  961 ISVVKILRVL RVLRPLRAIN RAKGLKHVVQ CVFVAIRTIG NIMIVTTLLQ FMFACIGVQL1020
 1021 FKGKFYSCTD EAKHTLKECK GSFLIYPDGD VSRPLVRERL WVNSDFNFDN VLSAMMALFT1080
 1081 VSTFEGWPAL LYKAIDAHAE DEGPIYNYHV EISVFFIVYI IIIAFFMMNI FVGFVIITFR1140
 1141 AQGEQEYQNC ELDKNQRQCV EYALKAQPLR RYIPKNPHQY RVWATVNSAA FEYLMFLLIL1200
 1201 LNTVALAMQH YEQTAPFNYA MDILNMVFTG LFTVEMVLKI IAFKPKHYFA DAWNTFDALI1260
 1261 VVGSVVDIAV TEVNNGGHLG ESSEDSSRIS ITFFRLFRVM RLVKLLSKGE GIRTLLWTFI1320
 1321 KSFQALPHVA LLIAMIFFIY AVIGMQMFGK VALQDGTQIN RNNNFQTFPQ AVLLLFRCAT1380
 1381 GEAWQEIMLA SLPGNRCDPE SDFGPGEEFT CGSNFAIVYF ISFFMLCAFL IINLFVAVIM1440
 1441 DNFDYLTRDW SILGPHHLDE FKRIWSEYDP GAKGRIKHLD VVALLRRIQP PLGFGKLCPH1500
 1501 RVACKRLVAM NVPLNSDGTV TFNATLFALV RTSLRIKTEG NLDQANQELR MVIKKIWKRI1560
 1561 KQKLLDEVIP PPDEEEVTVG KFYATFLIQD YFRKFRRRKE KGLLGADAPT STSSVLQAGL1620
 1621 RSLQDLGPEI RQALTYALEE EEEEEEARQV KEAEEEEAET TPETYKDSID SQPQAQWNSR1680
 1681 ISVSLPKLRE TPDSLSTGPS DDDGVAPNSR QPSGLQAGSQ PHRRGSGVFM FTIPEEGSTQ1740
 1741 LKGVQGQDNQ NEEQEVPDWT PNLDEQAGMP SNPVLLPPHW SQQHVNGHHV PRRRLLPPTP1800
 1801 AGRKPSFTIQ CLQRQGSCED LPIPGTYHRG RTSGPGRAQG SWAAPPQKGR LLYAPLLLVE1860
 1861 ESTVGEGYLG KLGGPLRTFT CLQVPGAPSD PSHRKRGSAD SLVEAVLISE GLGLFAQDPR1920
 1921 FVALAKQEIA DACHLTLDEM DSAASDLLAQ RTTSLYSDEE SILSRFDEED LGDEMACVHA1980
 1981 L

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: gi|16758518, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: