Protein Overview: CO1A1_RAT

General Information:
Name(s) found:	CO1A1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|27688933\|ref\|XP_213440.1\| PREDICTED: similar to procollagen, type I, alpha 1 [Rattus norvegicus] [NCBI NR] gi\|158711704\|ref\|NP_445756.1\| collagen, type 1, alpha 1 [Rattus norvegicus] [NCBI NR] gi\|149053910\|gb\|EDM05727.1\| procollagen, type 1, alpha 1, isoform CRA_b [Rattus norvegicus] [NCBI NR] gi\|126631239\|gb\|AAI33729.1\| Col1a1 protein [Rattus norvegicus] [NCBI NR] gi\|109491672\|ref\|XP_001081230.1\| PREDICTED: similar to procollagen, type I, alpha 1 [Rattus norvegicus] [NCBI NR] Collagen alpha-1(I) chain OS=Rattus norvegicus GN=Col1a1 PE=1 SV=5 [Swiss-Prot] similar to Collagen alpha1 [HMR_022704-rand.fasta] similar to Collagen alpha1 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] collagen, type 1, alpha 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Col1a1 protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] procollagen, type 1, alpha 1, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] PREDICTED: similar to procollagen, type I, alpha 1 [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Col1a1 collagen, type 1, alpha 1 [rat-ipi-250309-contam.fasta] Collagen alpha-1(I) chain OS=Rattus norvegicus GN=Col1a1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	1453 amino acids
Gene Ontology:
Cellular Component:	extracellular space [IDA] cytoplasm [UNKNOWN][IEA] collagen [UNKNOWN][IEA] collagen type I [UNKNOWN][IEA] extracellular matrix [UNKNOWN] extracellular region [UNKNOWN][IEA] cellular_component [ND] proteinaceous extracellular matrix [UNKNOWN] plasma membrane [UNKNOWN]
Biological Process:	protein transport [UNKNOWN][IEA] response to cAMP [IEP] skin morphogenesis [UNKNOWN][IEA] skin development [UNKNOWN] bone trabecula formation [UNKNOWN][IEA] face morphogenesis [UNKNOWN][IEA] response to mechanical stimulus [IEP] sensory perception of sound [UNKNOWN][IEA] skeletal system development [UNKNOWN] blood vessel development [UNKNOWN][IEA] ossification [IEP] negative regulation of cell-substrate adhesion [UNKNOWN][IEA] osteoblast differentiation [UNKNOWN][IEA] response to inorganic substance [IEP] collagen biosynthetic process [UNKNOWN][IEA] tooth mineralization [UNKNOWN][IEA] protein heterotrimerization [UNKNOWN] cartilage development involved in endochondral bone morphogenesis [UNKNOWN][IEA] response to nutrient [IEP] response to hydrogen peroxide [IEP] visual perception [UNKNOWN][IEA] embryonic skeletal system development [UNKNOWN][IEA] response to peptide hormone stimulus [IEP] skeletal system morphogenesis [UNKNOWN] cellular response to retinoic acid [IEP] cellular response to growth factor stimulus [IEP] intramembranous ossification [UNKNOWN][IEA] endochondral ossification [UNKNOWN][IEA] response to corticosteroid stimulus [IEP] collagen fibril organization [UNKNOWN][IEA]
Molecular Function:	identical protein binding [UNKNOWN][IEA] protein binding [UNKNOWN] extracellular matrix structural constituent [UNKNOWN][IEA] molecular_function [ND] platelet-derived growth factor binding [UNKNOWN][IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFVDLRLL LLLGATALLT HGQEDIPEVS CIHNGLRVPN GETWKPDVCL ICICHNGTAV  60
   61 CDGVLCKEDL DCPNPQKREG ECCPFCPEEY VSPDAEVIGV EGPKGDPGPQ GPRGPVGPPG 120
  121 QDGIPGQPGL PGPPGPPGPP GPPGLGGNFA SQMSYGYDEK SAGVSVPGPM GPSGPRGLPG 180
  181 PPGAPGPQGF QGPPGEPGEP GASGPMGPRG PPGPPGKNGD DGEAGKPGRP GERGPPGPQG 240
  241 ARGLPGTAGL PGMKGHRGFS GLDGAKGDTG PAGPKGEPGS PGENGAPGQM GPRGLPGERG 300
  301 RPGPPGSAGA RGNDGAVGAA GPPGPTGPTG PPGFPGAAGA KGEAGPQGAR GSEGPQGVRG 360
  361 EPGPPGPAGA AGPAGNPGAD GQPGAKGANG APGIAGAPGF PGARGPSGPQ GPSGAPGPKG 420
  421 NSGEPGAPGN KGDTGAKGEP GPAGVQGPPG PAGEEGKRGA RGEPGPSGLP GPPGERGGPG 480
  481 SRGFPGADGV AGPKGPAGER GSPGPAGPKG SPGEAGRPGE AGLPGAKGLT GSPGSPGPDG 540
  541 KTGPPGPAGQ DGRPGPAGPP GARGQAGVMG FPGPKGTAGE PGKAGERGVP GPPGAVGPAG 600
  601 KDGEAGAQGA PGPAGPAGER GEQGPAGSPG FQGLPGPAGP PGEAGKPGEQ GVPGDLGAPG 660
  661 PSGARGERGF PGERGVQGPP GPAGPRGNNG APGNDGAKGD TGAPGAPGSQ GAPGLQGMPG 720
  721 ERGAAGLPGP KGDRGDAGPK GADGSPGKDG VRGLTGPIGP PGPAGAPGDK GETGPSGPAG 780
  781 PTGARGAPGD RGEPGPPGPA GFAGPPGADG QPGAKGEPGD TGVKGDAGPP GPAGPAGPPG 840
  841 PIGNVGAPGP KGSRGAAGPP GATGFPGAAG RVGPPGPSGN AGPPGPPGPV GKEGGKGPRG 900
  901 ETGPAGRPGE VGPPGPPGPA GEKGSPGADG PAGSPGTPGP QGIAGQRGVV GLPGQRGERG 960
  961 FPGLPGPSGE PGKQGPSGAS GERGPPGPMG PPGLAGPPGE SGREGSPGAE GSPGRDGAPG1020
 1021 AKGDRGETGP AGPPGAPGAP GAPGPVGPAG KNGDRGETGP AGPAGPIGPA GARGPAGPQG1080
 1081 PRGDKGETGE QGDRGIKGHR GFSGLQGPPG SPGSPGEQGP SGASGPAGPR GPPGSAGSPG1140
 1141 KDGLNGLPGP IGPPGPRGRT GDSGPAGPPG PPGPPGPPGP PSGGYDFSFL PQPPQEKSQD1200
 1201 GGRYYRADDA NVVRDRDLEV DTTLKSLSQQ IENIRSPEGS RKNPARTCRD LKMCHSDWKS1260
 1261 GEYWIDPNQG CNLDAIKVYC NMETGQTCVF PTQPSVPQKN WYISPNPKEK KHVWFGESMT1320
 1321 DGFQFEYGSE GSDPADVAIQ LTFLRLMSTE ASQNITYHCK NSVAYMDQQT GNLKKSLLLQ1380
 1381 GSNEIELRGE GNSRFTYSTL VDGCTSHTGT WGKTVIEYKT TKTSRLPIID VAPLDIGAPD1440
 1441 QEFGMDIGPA CFV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: CO1A1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: