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Protein Overview: gi|149033378, gi...

General Information:
Name(s) found: gi|56799436 [NCBI NR]
gi|55778344 [NCBI NR]
gi|27710376 [NCBI NR]
gi|149033379 [NCBI NR]
gi|149033378 [NCBI NR]
gi|149033377 [NCBI NR]
gi|117558386 [NCBI NR]
Description(s) found:
Found 18 descriptions.
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  • gi|56799436|ref|NP_001008314.2| chromobox homolog 3 [Rattus norvegicus] [NCBI NR]
  • gi|55778344|gb|AAH86601.1| Chromobox homolog 3 (HP1 gamma homolog, Drosophila) [Rattus norvegicus] [NCBI NR]
  • ref|XP_216146.1| similar to chromobox homolog 3; heterochromatin protein HP1 gamma; HP1 gamma homolog; heterochromatin-like protein 1 [Rattus norvegicus] [NCBI NR]
  • gi|149033379|gb|EDL88180.1| chromobox homolog 3 (HP1 gamma homolog, Drosophila), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149033378|gb|EDL88179.1| chromobox homolog 3 (HP1 gamma homolog, Drosophila), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149033377|gb|EDL88178.1| chromobox homolog 3 (HP1 gamma homolog, Drosophila), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|117558386|gb|AAI27509.1| Chromobox homolog 3 (HP1 gamma homolog, Drosophila) [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 183 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IEA]
    nucleus [UNKNOWN][IEA]
    nuclear centromeric heterochromatin [IEA]
    condensed chromosome, centromeric region [IEA]
    spindle [UNKNOWN]
    chromocenter [UNKNOWN][IEA]
    nuclear euchromatin [UNKNOWN]
    chromatin [UNKNOWN][IEA]
    nuclear heterochromatin [UNKNOWN]
    Biological Process: negative regulation of transcription, DNA-dependent [UNKNOWN][IEA]
    negative regulation of transcription [UNKNOWN]
    chromatin assembly or disassembly [IEA]
    Molecular Function: protein domain specific binding [UNKNOWN]
    protein binding [UNKNOWN]
    chromatin binding [IEA]
    transcription repressor activity [UNKNOWN]
    general transcriptional repressor activity [UNKNOWN]
    enzyme binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNKTTLQK MGKKQNGKSK KVEEAEPEEF VVEKVLDRRV VNGKVEYFLK WKGFTDADNT  60
   61 WEPEENLDCP ELIEAFLNSQ KAGKEKDGTK RKSLSDSESD DSKSKKKRDA ADKPRGFARG 120
  121 LDPERIIGAT DSSGELMFLM KWKDSDEADL VLAKEANMKC PQIVIAFYEE RLTWHSCPED 180
  181 EAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 13.09691 No description for 2d9uA was found.
    2 View Details [93..183] PSI-BLAST 19.69897 No description for 2fmmA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle