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Protein Overview: gi|45551023, gi|...

General Information:
Name(s) found: gi|45551023 [NCBI NR]
gi|45445412 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|45551023|ref|NP_724452.2| CG7849, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|45445412|gb|AAF57283.2| CG7849, isoform A [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 246 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pseudouridine synthesis [IEA]
    RNA processing [IEA]
    Molecular Function: RNA binding [IEA]
    pseudouridine synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTKVYDAA TVFKHMNGIL NVYKPSGMKV KHVRNAILSN ICKVFGINRG AGQSSSIRKN  60
   61 RPVRVYHLIG HLGIATENNL PDSRVIMRSN HRHVSADRIS SLAASMQASH QRKMFELCGV 120
  121 DLQTQEAYEL ACRGLLRPAD DSQPVVYGIK LIHFDRPHFT LELHAINETQ EYLATLVHDM 180
  181 ALDLRTVAHC SQLRCVRHAH FDVTDSLLRH AWHLPGIIKN LRQQRDILRA HPQLLRQQRV 240
  241 ELRATD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] PSI-BLAST 68.69897 Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.49175104308599 bayes_pls_golite062009
  • isomerase activity
    		•  0.87098451300632 bayes_pls_golite062009
  • intramolecular transferase activity
    		•  0.86450504855635 bayes_pls_golite062009
  • pseudouridine synthase activity
    		•  0.86297783328106 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle