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Protein Overview: CG13978-PA

General Information:
Name(s) found: CG13978-PA / FBpp0084552 [FlyBase]
Description(s) found:
Found 17 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG13978 (CG13978, FBgn0039518). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23289911..23292725. It has the cytological map location 98A1-98A2. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: transferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: GPI anchor biosynthetic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 898 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [IEA]
    Biological Process: GPI anchor biosynthetic process [IEA]
    Molecular Function: transferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKLQALVVH ILLMGAILNT YFQHTLLPNL VPQKTMRELG LEPPADRLVV FVTDGLRAAT  60
   61 FLANNGSDVP DLKDIYRQQG RIGISRTCAP TMTRPGHIAI FAGFHEDPAA SLMHLCYNPG 120
  121 DFDTVFNRSR NMIGWAHSYI VGYFVKLSHG GAPLRFDSYM ERDLPEKLTC DKWAFDKVEN 180
  181 FLRNVDNVRE WRNYKPAVFF VYLADMDIAA HRFKPLSKKF FAKLQYTQRG IRNTYELFER 240
  241 VFNDSRTAYL MTSDHGMNNE GAHGSGSPLE VETPLFMWGA GVKRDEIDAE ANFPEKPNIS 300
  301 QVDQTQLAPL MSSLIGLPPP KNNLALMPVG YLNVSDEYQA VALHLNVLQL LSQAEILIGR 360
  361 HEKAIFYKWL PKFKELHIGV IDQYAAQFDI LKSEGNLTDA MEFCKEYGKL AKKCLTYYNQ 420
  421 YYQTPLIVAN SMSYMIWFYC LLLQLTRLSK KEKMQRRGFM TVSTLILAMI GILLIAMMEL 480
  481 QKVPHIAAFY LILPVGMLIM AQAERPVRGY WIFHPLWNFG FILVPAVLIM SMTFIIRHLW 540
  541 VLYGISVLLN NRRALRKPSI KLFIWLSLAL IVTAILFMEQ RTIKGLKTIP VKDYHVLYVS 600
  601 MVLAIIRPLI LGHRHDPRVW TFNSLTLVVG AFGVYQYKFY ESVSSYVYVV TWSFLFFAFL 660
  661 SIVYFAKSLP EARKRLELIT INMITVLSLL TNSWGCLNFQ IAITEFIFGL QIYEETKETK 720
  721 EIEDAKDEHT SLQNLKGFYR YGYMILLYFY VSFFLAGHWI SSFLFKPTTA RLFYPHFSLY 780
  781 IAGSLVLLKI FIPSVIFICA LYAMVPFVRK NARSILISIF MISNAMGLYQ YYFIRNRGSW 840
  841 RKIRMFLDQI LLTHAVNFML LLGISLAKIF LANTTMERPG QKRARTTRSN LAAAETEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..420] PSI-BLAST 44.0 No description for 2qzuA was found.
    2 View Details [421..710] deduced N/A No confident structure predictions are available.
    3 View Details [711..898] MSA 2.115975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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