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View Structure Prediction Details

Protein: CG13978-PA
Organism: Drosophila melanogaster
Length: 898 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13978-PA.

Description E-value Query
Range
Subject
Range
MCD4_ASPOR - GPI ethanolamine phosphate transferase 1 OS=Aspergillus oryzae GN=mcd4 PE=3 SV=1
MCD4_ASPOR - GPI ethanolamine phosphate transferase 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=mcd4 ...
523.0 [0..2] [894..9]

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Predicted Domain #1
Region A:
Residues: [1-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKLQALVVH ILLMGAILNT YFQHTLLPNL VPQKTMRELG LEPPADRLVV FVTDGLRAAT  60
   61 FLANNGSDVP DLKDIYRQQG RIGISRTCAP TMTRPGHIAI FAGFHEDPAA SLMHLCYNPG 120
  121 DFDTVFNRSR NMIGWAHSYI VGYFVKLSHG GAPLRFDSYM ERDLPEKLTC DKWAFDKVEN 180
  181 FLRNVDNVRE WRNYKPAVFF VYLADMDIAA HRFKPLSKKF FAKLQYTQRG IRNTYELFER 240
  241 VFNDSRTAYL MTSDHGMNNE GAHGSGSPLE VETPLFMWGA GVKRDEIDAE ANFPEKPNIS 300
  301 QVDQTQLAPL MSSLIGLPPP KNNLALMPVG YLNVSDEYQA VALHLNVLQL LSQAEILIGR 360
  361 HEKAIFYKWL PKFKELHIGV IDQYAAQFDI LKSEGNLTDA MEFCKEYGKL AKKCLTYYNQ 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 2qzuA
Description: No description for 2qzuA was found.

Predicted Domain #2
Region A:
Residues: [421-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYQTPLIVAN SMSYMIWFYC LLLQLTRLSK KEKMQRRGFM TVSTLILAMI GILLIAMMEL  60
   61 QKVPHIAAFY LILPVGMLIM AQAERPVRGY WIFHPLWNFG FILVPAVLIM SMTFIIRHLW 120
  121 VLYGISVLLN NRRALRKPSI KLFIWLSLAL IVTAILFMEQ RTIKGLKTIP VKDYHVLYVS 180
  181 MVLAIIRPLI LGHRHDPRVW TFNSLTLVVG AFGVYQYKFY ESVSSYVYVV TWSFLFFAFL 240
  241 SIVYFAKSLP EARKRLELIT INMITVLSLL TNSWGCLNFQ IAITEFIFGL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [711-898]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QIYEETKETK EIEDAKDEHT SLQNLKGFYR YGYMILLYFY VSFFLAGHWI SSFLFKPTTA  60
   61 RLFYPHFSLY IAGSLVLLKI FIPSVIFICA LYAMVPFVRK NARSILISIF MISNAMGLYQ 120
  121 YYFIRNRGSW RKIRMFLDQI LLTHAVNFML LLGISLAKIF LANTTMERPG QKRARTTRSN 180
  181 LAAAETEP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle