Protein Overview: ind-PA

General Information:
Name(s) found:	ind-PA / FBpp0075421 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|45553119\|ref\|NP_996087.1\| intermediate neuroblasts defective [Drosophila melanogaster] [NCBI NR] gi\|45445888\|gb\|AAS65004.1\| intermediate neuroblasts defective [Drosophila melanogaster] [NCBI NR] gi\|41618104\|tpg\|DAA02991.1\| TPA_inf: HDC10207 [Drosophila melanogaster] [NCBI NR] gi\|115646555\|gb\|ABJ17080.1\| RT01026p [Drosophila melanogaster] [NCBI NR] The gene intermediate neuroblasts defective is referred to in FlyBase by the symbol Dmel\ind (CG11551, FBgn0025776). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:15035894..15037177. It has the cytological map location 71B2. There is experimental evidence that it has the molecular function</span>: transcription factor activity; transcription factor binding; sequence-specific DNA binding. There is experimental evidence that it is involved in the biological process</span>: negative regulation of gene-specific transcription from RNA polymerase II promoter; regulation of gene-specific transcription from RNA polymerase II promoter. 9 alleles are reported. The phenotypes of these alleles are annotated with: RP2 neuron; neuroblast of ventral nerve cord primordium; intermediate ventral neurectoderm. It has one annotated transcript and one annotated polypeptide. [FlyBase] (AAS65004) CG11551-PA [DrosMelano7227.FASTAC.txt] (AE003532) ind gene product [Drosophila melanogaster] [yeastflysequest.fasta] CG11551-PA [Drosophila melanogaster]gi\|45553119\|ref\|NP_996087.1\| CG11551-PA [Drosophila melanogaster]gi\|41618104\|tpg\|DAA02991.1\| TPA: HDC10207 [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas] type=protein; loc=3L:complement(15036002..15037177); ID=FBpp0075421; name=ind-PA; parent=FBgn0025776,FBtr0075668; dbxref=GB_protein:AAS65004.1,FlyBase:FBpp0075421,FlyBase_Annotation_IDs:CG11551-PA,REFSEQ:NP_996087,GB_protein:AAS65004; MD5=e2c229096686d5d0 [fly-100309-contam.fasta] RT01026p [Drosophila melanogaster] [nr-271106-contam.fasta] intermediate neuroblasts defective CG11551-PA [Drosophila melanogaster] [nr-271106-contam.fasta] CG11551-PA [Drosophila melanogaster] [nr-271106-contam.fasta] TPA_inf: HDC10207 [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=3L:complement(15036002..15037177); ID=FBpp0075421; name=ind-PA; parent=FBgn0025776,FBtr0075668; dbxref=GB_protein:AAS65004.1,FlyBase:FBpp0075421,FlyBase_Annotation_IDs:CG11551-PA,REFSEQ:NP_996087,GB_protein:AAS65004; MD5=e2c229096686d5d07c5e04f07f106a84; length=391; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:complement(15036002..15037177); ID=FBpp0075421; name=ind-PA; parent=FBgn0025776,FBtr0075668; dbxref=GB_protein:AAS65004.1,FlyBase:FBpp0075421,FlyBase_Annotation_IDs:CG11551-PA,REFSEQ:NP_996087,GB_protein:AAS65004; MD5=e2c229096686d5d07c5e04f07f106a84; length=391; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] HDC10207 OS=Drosophila melanogaster GN=ind PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
Organism:	Drosophila melanogaster
Length:	391 amino acids
Gene Ontology:
Cellular Component:	nucleus [ISS]
Biological Process:	ventral cord development [NAS][TAS] central nervous system development [NAS] neuroblast fate determination [TAS] regulation of transcription, DNA-dependent [IEA] pattern specification process [NAS] ectoderm development [TAS] brain development [TAS] regulation of transcription [IEA][ISS] regulation of gene-specific transcription from RNA polymerase II promoter [IMP] dorsal/ventral pattern formation [TAS] negative regulation of gene-specific transcription from RNA polymerase II promoter [IDA]
Molecular Function:	transcription factor activity [IDA][ISS] sequence-specific DNA binding [IDA] transcription factor binding [IPI]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTKWPNTLA QTTLELALRG VEVANQPPEQ SLEVYKNRVR AQQPDSFAQS AIVFSSSSRD  60
   61 QLENEIPQKP KMSRSFLMDS LLSDRPNLSQ KKEKLGSPGG SPTAAAAVAA AAMLPSIPML 120
  121 PYPASYVGSY LFSLGIQQQQ QQQQQQQQHA AAAAAAAAAA AALQQHPHVS SSPGSLYHPY 180
  181 AQLFASKRKS SGFSNYEGCY PSPPLSANPN SQQLPPIHNL YGSPVVGGLP LPEPGSFCTS 240
  241 PSASSSASLD YTNNFDEPQG KRFKHESSCS PNSSPLKNHS SGGPVEITPL INDYADSSKR 300
  301 IRTAFTSTQL LELEREFSHN AYLSRLRRIE IANRLRLSEK QVKIWFQNRR VKQKKGGSES 360
  361 PTFNLSTNSN GSPQASPVSP QVKVHELKVE A

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.43

Protein Overview: ind-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: