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Protein Overview: YFHP_ECOLI, ISCR...

General Information:
Name(s) found: YFHP_ECOLI [Swiss-Prot]
ISCR_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|84027941|sp|P0AGK8.1|ISCR_ECOLI RecName: Full=HTH-type transcriptional regulator iscR [NCBI NR]
  • pir||B65030 hypothetical protein b2531 - Escherichia coli (strain K-12) [NCBI NR]
  • pir||E91053 hypothetical protein ECs3397 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • pir||A85898 hypothetical protein Z3798 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • gi|209763236|gb|ACI79930.1| hypothetical protein ECs3397 [Escherichia coli] [NCBI NR]
  • gi|209763234|gb|ACI79929.1| hypothetical protein ECs3397 [Escherichia coli] [NCBI NR]
  • gi|209763232|gb|ACI79928.1| hypothetical protein ECs3397 [Escherichia coli] [NCBI NR]
  • gi|209763230|gb|ACI79927.1| hypothetical protein ECs3397 [Escherichia coli] [NCBI NR]
  • gi|209763228|gb|ACI79926.1| hypothetical protein ECs3397 [Escherichia coli] [NCBI NR]
  • gi|1799939|dbj|BAA16425.1| DNA-binding transcriptional activator [Escherichia coli W3110] [NCBI NR]
  • (P0AGK8) Protein yfhP [Swiss-Prot]
  • HTH-type transcriptional regulator iscR - Escherichia coli [Swiss-Prot]
  • Fe-S cluster-containing transcription factor; transcriptional repressor of iscRSUA operon [Escherichia coli K12]gi|15832651|ref|NP_311424.1| hypothetical protein ECs3397 [Escherichia coli O157:H7]gi|30063921|ref|NP_838092.1| hypothetical protein S2750 [ [nrdb_11152004_Chlamydomonas]
  • HTH-type transcriptional regulator iscR [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • HTH-type transcriptional regulator iscR OS=Escherichia coli (strain K12) GN=iscR PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 162 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTSKGRYA VTAMLDVALN SEAGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVSSVRG  60
   61 PGGGYLLGKD ASSIAVGEVI SAVDESVDAT RCQGKGGCQG GDKCLTHALW RDLSDRLTGF 120
  121 LNNITLGELV NNQEVLDVSG RQHTHDAPRT RTQDAIDVKL RA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 25.39794 X-ray crystal structure of BC1842 protein from Bacillus cereus, a member of the Rrf2 family of putative transcription regulators.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.03124001296907 bayes_pls_golite062009
  • DNA binding
    		•  3.6318990385733 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.62005343025125 bayes_pls_golite062009
  • transcription factor activity
    		•  2.87763604150694 bayes_pls_golite062009
  • binding
    		•  2.62737887048829 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.11065232292582 bayes_pls_golite062009
  • transcription activator activity
    		•  1.0291156554117 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.910965849978864 bayes_pls_golite062009
  • protein binding
    		•  0.498124455750984 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.303382870006146 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle