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Protein Overview: YBAE_ECOLI

General Information:
Name(s) found: YBAE_ECOLI [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Hypothetical protein ybaE - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLNRLNQY QRLWQPSAGK PQTVTVSELA ERCFCSERHV RTLLRQAQEA GWLEWQAQSG  60
   61 RGKRGQLRFL VTPESLRNAM MEQALETGKQ QDVLELAQLA PGELRTLLQP FMGGQWQNDT 120
  121 PTLRIPYYRP LEPLQPGFLP GRAEQHLAGQ IFSGLTRFDN NTQRPIGDLA HHWETSTDGL 180
  181 RWDFYLRSTL HWHNGDAVKA SHLHQRLLML LQLPALDQLF ISVKRIEVTH PQCLTFFLHR 240
  241 PDYWLAHRLA SYCSHLAHPQ FPLIGTGPFR LTQFTAELVR LESHDYYHLR HPLLKAVEYW 300
  301 ITPPLFEKDL GTSCRHPVQI TIGKPEELQR VSQVSSGISL GFCYLTLRKS PRLSLWQARK 360
  361 VISIIHQSGL LQTLEVGENL ITASHALLPG WTIPHWQVPD EVKLPKTLTL VYHLPIELHT 420
  421 MAERLQATLA AEGCELTIIF HNAKNWDDTT LQAHADLMMG DRLIGEAPEY TLEQWLRCDP 480
  481 LWPHVFDAPA YAHLQSTLDA VQIMPDEENR FNALKAVFSQ LMTDATLTPL FNYHYRISAP 540
  541 PGVNGVRLTP RGWFEFTEAW LPAPSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] FFAS03 1.21 STRUCTURE OF APO-AND HOLO-DIPHTHERIA TOXIN REPRESSOR
    2 View Details [112..566] PSI-BLAST 119.0 Dipeptide-binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.0250202903001 bayes_pls_golite062009
  • protein binding
    		•  0.15188391702134 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transporter activity
    		•  2.40545849033896 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.14350700163645 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.78426408099234 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  1.67192694800915 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  1.67011353320924 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  1.66243055906859 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  1.66243055906859 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  1.66071693096018 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.63640317740517 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.52675709081397 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.4521463765384 bayes_pls_golite062009
  • ATPase activity
    		•  1.40678917547155 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.40509342124518 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.38450733218732 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.38349438029763 bayes_pls_golite062009
  • binding
    		•  1.28024527565554 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.01146367558475 bayes_pls_golite062009
  • hydrolase activity
    		•  0.458908097342689 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0662041278342053 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle