YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Su(var)3-7-PA

General Information:
Name(s) found: Su(var)3-7-PA / FBpp0082204 [FlyBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • The gene Suppressor of variegation 3-7 is referred to in FlyBase by the symbol Dmel\Su(var)3-7 (CG8599, FBgn0003598). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9090077..9095760. It has the cytological map location 87E3. There is experimental evidence that it has the molecular function</span>: SUMO binding. The biological processes in which it is involved are not known. 47 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; humeral bristle; sex comb; wing; ommatidium. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1250 amino acids

    Gene Ontology:
    Cellular Component: polytene chromosome chromocenter [TAS]
    nucleus [NAS]
    heterochromatin [TAS]
    chromosome, centromeric region [TAS]
    intracellular [IEA]
    Biological Process: NONE FOUND
    Molecular Function: DNA binding [IEA]
    SUMO binding [IPI]
    zinc ion binding [IEA]
    protein binding [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRDSSMQAK NLDAQCNPDL KMASANSETL ASATHELKIM DVEGGALVDP DHIEEVETSM  60
   61 VIVVDDDDGD VAMVVEEDKH PMRDDPCIED IMDDEHAPLV AELQSALNNP DDKQASEDPL 120
  121 LEDQEREPDA MSTKTEPSSD AESSHSYHDP MGLLERIEIH DPGDSQDDDD EDDESSNGGG 180
  181 VDGGMRRKMP RAQRWLLWMK RWPWILHEDS DGTLAFCLYC NISINVNNRS RHIQQHNVSL 240
  241 SHQERECNYL AFKKSEEETR GAISDNEIKH EFGTKSYVAA MKQKRISETE AFNNFNWLRW 300
  301 LRWHPWLERS MPTGTIGTCR ICSVRMNVEF VYLRKRHETT KGHMEALRNL DSDKRSRKRK 360
  361 RSKSNSVTNS GGDEAEREKE SEPEVGPEDA QDTPVVMMNG DVDSGDDPGK WCALIPDTNP 420
  421 QQCRCTLCNC TMAITSFLRH CKTRAHCHML STPAEKGSSD IRGIWAVFAD MHPWLIADPE 480
  481 DPSIGYCSVC RKRFMYGNSE IKRKNHEKSE KHTLALASAK AGIEVGSADG RGGDNMDEEE 540
  541 AAASDQAQSS QTDDSEDNDD DNWSEIQKLG KGFAHKSSSE PRKATVRAGV RFYPWLCYSK 600
  601 DRKTQICKFC RVRFHNEAAK ARHELSARHV KLVKQFKMRQ AKLHQGTNTQ TKHNAQDDEE 660
  661 SQEQDEEYGE EEEDAEEDSQ SNFDLGTVQA RKTARADNKL FVKPIPATMK GKVMVWKGRF 720
  721 PWLSYKKNEQ RGNYAWCKLC EVSLYLPSSK WASKHQRTSR HIRLRIDRKR NGGNPLKTSN 780
  781 KNSGEISTVV ATASALASAE ARQKAAMAEL QAKYDWLDPD ANDENHCHCR VCDSRLPIKV 840
  841 FYLRQHDASR KHVENKERQR ANAAAAANAP SVSPTSTVDA ERQESGMDKE SENDMSVRSD 900
  901 GSTAEPLAKR SRRSMEVRRI IRALRDSMGK RQEERSQMDM ARDMICSSFD IVTRLRTLER 960
  961 ESVAHNESMA QAPPSVTVSP IKPPEPRHVM DLFFDSISPT MKSLPPDLAA EGKSKIMQLV1020
 1021 CSLELRAMQR NATTPTPATV SASSKWPSST TVTPVKTPPA PISAPLASVD ADLHSSVVTT1080
 1081 PHEYNNGQNN NNDKETVPKE PVTGASSAQV TINGSAKDLP ENIRRILTSN QTQVTNRLET1140
 1141 DSVRCVPLDK LTTQSRTNVN GRLSQGGTSE APSTPQADLS NGNTLAMIRQ IRVNNNNSSK1200
 1201 ITVTNTPQMQ QPQQAQASIT SSTPIMRGGP SSNGCQITTF RTMVNHNRRP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] deduced N/A No confident structure predictions are available.
    2 View Details [227..550] PSI-BLAST 24.0 Heavy meromyosin subfragment
    3 View Details [551..776] PSI-BLAST 13.09691 No description for 2i1jA was found.
    4 View Details [777..930] FFAS03 1.11 Solution Structure of a Human C2H2-type Zinc Finger Protein
    5 View Details [931..1017] deduced N/A No confident structure predictions are available.
    6 View Details [1018..1250] PSI-BLAST 4.69897 Crystal structure of aspartic proteinase from Irpex lacteus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.64382899824662 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.34250831649865 bayes_pls_golite062009
  • DNA binding
    		•  1.19507161856307 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.973915756412119 bayes_pls_golite062009
  • transcription factor activity
    		•  0.134824658171215 bayes_pls_golite062009
    5 No functions predicted.
    6
    Term Confidence Notes
  • hydrolase activity
    		•  0.885607925818602 bayes_pls_golite062009
  • catalytic activity
    		•  0.64464550126476 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.560063975176208 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.560063975176208 bayes_pls_golite062009
  • binding
    		•  0.176280665815209 bayes_pls_golite062009
  • peptidase activity
    		•  0.0546940803592719 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle