| Protein: | Su(var)3-7-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Su(var)3-7-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
799.0 | [0..82] | [1250..1] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MDRDSSMQAK NLDAQCNPDL KMASANSETL ASATHELKIM DVEGGALVDP DHIEEVETSM 60
61 VIVVDDDDGD VAMVVEEDKH PMRDDPCIED IMDDEHAPLV AELQSALNNP DDKQASEDPL 120
121 LEDQEREPDA MSTKTEPSSD AESSHSYHDP MGLLERIEIH DPGDSQDDDD EDDESSNGGG 180
181 VDGGMRRKMP RAQRWLLWMK RWPWILHEDS DGTLAFCLYC NISINV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [227-550] |
1 11 21 31 41 51
| | | | | |
1 NNRSRHIQQH NVSLSHQERE CNYLAFKKSE EETRGAISDN EIKHEFGTKS YVAAMKQKRI 60
61 SETEAFNNFN WLRWLRWHPW LERSMPTGTI GTCRICSVRM NVEFVYLRKR HETTKGHMEA 120
121 LRNLDSDKRS RKRKRSKSNS VTNSGGDEAE REKESEPEVG PEDAQDTPVV MMNGDVDSGD 180
181 DPGKWCALIP DTNPQQCRCT LCNCTMAITS FLRHCKTRAH CHMLSTPAEK GSSDIRGIWA 240
241 VFADMHPWLI ADPEDPSIGY CSVCRKRFMY GNSEIKRKNH EKSEKHTLAL ASAKAGIEVG 300
301 SADGRGGDNM DEEEAAASDQ AQSS
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [551-776] |
1 11 21 31 41 51
| | | | | |
1 QTDDSEDNDD DNWSEIQKLG KGFAHKSSSE PRKATVRAGV RFYPWLCYSK DRKTQICKFC 60
61 RVRFHNEAAK ARHELSARHV KLVKQFKMRQ AKLHQGTNTQ TKHNAQDDEE SQEQDEEYGE 120
121 EEEDAEEDSQ SNFDLGTVQA RKTARADNKL FVKPIPATMK GKVMVWKGRF PWLSYKKNEQ 180
181 RGNYAWCKLC EVSLYLPSSK WASKHQRTSR HIRLRIDRKR NGGNPL
|
| Detection Method: | |
| Confidence: | 13.09691 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [777-930] |
1 11 21 31 41 51
| | | | | |
1 KTSNKNSGEI STVVATASAL ASAEARQKAA MAELQAKYDW LDPDANDENH CHCRVCDSRL 60
61 PIKVFYLRQH DASRKHVENK ERQRANAAAA ANAPSVSPTS TVDAERQESG MDKESENDMS 120
121 VRSDGSTAEP LAKRSRRSME VRRIIRALRD SMGK
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.64382899824662 | bayes_pls_golite062009 |
| nucleic acid binding | 1.34250831649865 | bayes_pls_golite062009 |
| DNA binding | 1.19507161856307 | bayes_pls_golite062009 |
| transcription regulator activity | 0.973915756412119 | bayes_pls_golite062009 |
| transcription factor activity | 0.134824658171215 | bayes_pls_golite062009 |
|
Region A: Residues: [931-1017] |
1 11 21 31 41 51
| | | | | |
1 RQEERSQMDM ARDMICSSFD IVTRLRTLER ESVAHNESMA QAPPSVTVSP IKPPEPRHVM 60
61 DLFFDSISPT MKSLPPDLAA EGKSKIM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1018-1250] |
1 11 21 31 41 51
| | | | | |
1 QLVCSLELRA MQRNATTPTP ATVSASSKWP SSTTVTPVKT PPAPISAPLA SVDADLHSSV 60
61 VTTPHEYNNG QNNNNDKETV PKEPVTGASS AQVTINGSAK DLPENIRRIL TSNQTQVTNR 120
121 LETDSVRCVP LDKLTTQSRT NVNGRLSQGG TSEAPSTPQA DLSNGNTLAM IRQIRVNNNN 180
181 SSKITVTNTP QMQQPQQAQA SITSSTPIMR GGPSSNGCQI TTFRTMVNHN RRP
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1wkrA |
| Description: | Crystal structure of aspartic proteinase from Irpex lacteus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 0.885607925818602 | bayes_pls_golite062009 |
| catalytic activity | 0.64464550126476 | bayes_pls_golite062009 |
| aspartic-type endopeptidase activity | 0.560063975176208 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 0.560063975176208 | bayes_pls_golite062009 |
| binding | 0.176280665815209 | bayes_pls_golite062009 |
| peptidase activity | 0.0546940803592719 | bayes_pls_golite062009 |
