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Protein Overview: gi|157820547, gi...

General Information:
Name(s) found: gi|157820547 [NCBI NR]
gi|149016466 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|157820547|ref|NP_001099885.1| Nipped-B homolog [Rattus norvegicus] [NCBI NR]
  • gi|149016466|gb|EDL75684.1| Nipped-B homolog (Drosophila) [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 1558 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    cellular_component [ND]
    cohesin loading complex [UNKNOWN]
    Biological Process: positive regulation of histone deacetylation [UNKNOWN]
    arm morphogenesis [UNKNOWN]
    external genitalia morphogenesis [UNKNOWN]
    gall bladder development [UNKNOWN]
    outflow tract morphogenesis [UNKNOWN]
    embryonic gut morphogenesis [UNKNOWN]
    fat cell differentiation [UNKNOWN]
    uterus morphogenesis [UNKNOWN]
    positive regulation of multicellular organism growth [UNKNOWN]
    regulation of developmental growth [UNKNOWN]
    face morphogenesis [UNKNOWN]
    regulation of hair cycle [UNKNOWN]
    sensory perception of sound [UNKNOWN]
    heart development [UNKNOWN]
    heart morphogenesis [UNKNOWN]
    cognition [UNKNOWN]
    negative regulation of gene-specific transcription from RNA polymerase II promoter [UNKNOWN]
    embryonic arm morphogenesis [UNKNOWN]
    biological_process [ND]
    maintenance of mitotic sister chromatid cohesion [UNKNOWN]
    mitotic sister chromatid cohesion [UNKNOWN]
    regulation of embryonic development [UNKNOWN]
    embryonic cranial skeleton morphogenesis [UNKNOWN]
    brain development [UNKNOWN]
    developmental growth [UNKNOWN]
    response to DNA damage stimulus [UNKNOWN]
    positive regulation of ossification [UNKNOWN]
    embryonic viscerocranium morphogenesis [UNKNOWN]
    eye morphogenesis [UNKNOWN]
    cellular response to X-ray [UNKNOWN]
    ear morphogenesis [UNKNOWN]
    cellular protein localization [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]
    histone deacetylase binding [UNKNOWN]
    protein C-terminus binding [UNKNOWN]
    chromo shadow domain binding [UNKNOWN]
    protein N-terminus binding [UNKNOWN]
    transcription repressor activity [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGDMPHVPI TTLAGIASLT DLLNQLPLPS PLPATTTKSL LFNSRIAEEV NCLLACRDDN  60
   61 LVSQLVHSLN QVSTDHIELK DNLGSDDPEG DIPVLLQAVL ARSPNVFREK SMQNRYVQSG 120
  121 MMMSQYKLSQ NSMHSSPASS NYQQTTISHS PSSRFVPPQT SSGNRFMPQQ NSPVPSPYAP 180
  181 QSPAGYMPYS HPSSYTTHPQ MQQASVSSPI VAGGLRNIHD NKVSGPLSGN SANHHADNPR 240
  241 HGSSDDYLHM VHRLSSDDGD SSAMRNAASF PLRSPQPVCS PAGSDGTPKG SRPPLILQSQ 300
  301 SLPCSSPRDV PPDILLDSPE RKQKKQKKMK LGKDEKDQNE KAAMYDIISS PTKDSTKLTL 360
  361 RLSRVRSSDM DQQEDMLSGM ENSNVSENDI PFNVQYPGQT SKTPITPQDV NRSLNAAQCL 420
  421 SQQEQTAFLP ANQVPVLQQN TSVATKQPQT SVVQNQQQVS QQGPIYDEVE LDALAEIERI 480
  481 ERESAIERER FSKEVQDKDK PLKKRKQDSY PQEAGGATGG NRPASQETGS TGNGSRPALM 540
  541 VSIDLHQAGR ADSQASLTQD SDNIKKPEET KQCNDAPISV LQEDSVGSLK SIPENHPETP 600
  601 KNKSDPELSK SEMKQNESRL SESKPNENQL GESKSNESKL ETKTETQTEE LKQSENKTTE 660
  661 SKQSESAVVE PKQNENRLCD TKPNDNKQNN TRSENTKARP ETPKQKAESR PETPKQKSEG 720
  721 RPETPKQKGD GRPETPKQKS EGRPETPKQK GEGRPETPKH RHENRKDSGK PSTEKKPDVS 780
  781 KHKQDIKSDS SRLKSERAEA LKQRPDGRSE SLRRDHDSKQ KSDDRGESER HRGDQSRVRR 840
  841 PETLRSSSRN EHSTKSDGSK TEKLERKHRH ESGDSRDRPS GEQKSRPDSP RVKQGDTNKS 900
  901 RPGFKSPNSK DDKRTEGNRS KVDSNKAHTD NKAEFPSYLL GGRSSALKNF VIPKIKRDKD 960
  961 GNITQETKKM DMKGEQKDKV EKMGLVEDLN KGAKPVVVLQ KLSLDDVQKL IKDREEKSRS1020
 1021 SLKSLKNKPS KSNKGSIDQS VLKELPPELL AEIESTMPLC ERVKMNKRKR STVNEKPKYA1080
 1081 EISSDEDNDS DEAFESSRKR HKKDDDKAWE YEERDRRSSG DHRRSGHSHD GRRSSGGGRY1140
 1141 RNRSPSDSDM EDYSPPPSLS EVARKMKKKE KQKKRKAYEP KLTPEEMMDS STFKRFTASI1200
 1201 ENILDNLEDM DFTAFGDDDE IPQELLLGKH QLNELGSESA KIKAMGIMDK LSTDKTVKVL1260
 1261 NILEKNIQDG SKLSTLLNHN NDTEEEERLW RDLIMERVTK SADACLTTIN IMTSPNMPKA1320
 1321 VYIEDVIERV IQYTKFHLQN TLYPQYDPVY RLDPHGGGLL SSKAKRAKCS THKQRVIVML1380
 1381 YNKVCDIVSS LSELLEIQLL TDTTILQVSS MGITPFFVEN VSELQLCAIK LVTAVFSRYE1440
 1441 KHRQLILEEI FTSLARLPTS KRSLRNFRLN SSDVDGEPMY IQMVTALVLQ LIQCVVHLPS1500
 1501 SEKDPNSEED SNKKVDQDVV ITNSYETAMR TAQNFLSIFL KKYYEFSVKM QLPFEQKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle