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Protein Overview: NAGB_ECOLI

General Information:
Name(s) found: NAGB_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|7245417|pdb|1CD5|A Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, T Conformer [NCBI NR]
  • pir||MUECNG glucosamine-6-phosphate deaminase (EC 3.5.99.6) - Escherichia coli (strain K-12) [NCBI NR]
  • gi|67469257|sp|P0A759.1|NAGB_ECOLI RecName: Full=Glucosamine-6-phosphate deaminase; AltName: Full=Glucosamine-6-phosphate isomerase; AltName: Full=GlcN6P deaminase; Short=GNPDA [NCBI NR]
  • gi|455176|gb|AAA24191.1| glucosamine-6-phosphate deaminase protein [NCBI NR]
  • pir||D90717 glucosamine-6-phosphate deaminase [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209776806|gb|ACI86715.1| glucosamine-6-phosphate deaminase [Escherichia coli] [NCBI NR]
  • gi|209776804|gb|ACI86714.1| glucosamine-6-phosphate deaminase [Escherichia coli] [NCBI NR]
  • gi|209776802|gb|ACI86713.1| glucosamine-6-phosphate deaminase [Escherichia coli] [NCBI NR]
  • gi|209776800|gb|ACI86712.1| glucosamine-6-phosphate deaminase [Escherichia coli] [NCBI NR]
  • gi|209776798|gb|ACI86711.1| glucosamine-6-phosphate deaminase [Escherichia coli] [NCBI NR]
  • gi|18158700|pdb|1FSF|A Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, T Conformer, At 1.9a Resolution [NCBI NR]
  • gi|18158699|pdb|1FS6|A Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, T Conformer, At 2.2a Resolution [NCBI NR]
  • gi|18158698|pdb|1FS5|B Chain B, A Discovery Of Three Alternate Conformations In The Active Site Of Glucosamine-6-Phosphate Isomerase [NCBI NR]
  • gi|18158697|pdb|1FS5|A Chain A, A Discovery Of Three Alternate Conformations In The Active Site Of Glucosamine-6-Phosphate Isomerase [NCBI NR]
  • gi|18158696|pdb|1FRZ|B Chain B, Glucosamine-6-Phosphate Deaminase From E.Coli, R Conformer. Complexed With The Allosteric Activator N-Acetyl- Glucosamine-6-Phosphate At 2.2 A Resolution [NCBI NR]
  • gi|18158695|pdb|1FRZ|A Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, R Conformer. Complexed With The Allosteric Activator N-Acetyl- Glucosamine-6-Phosphate At 2.2 A Resolution [NCBI NR]
  • gi|18158694|pdb|1FQO|B Chain B, Glucosamine 6-Phosphate Deaminase Complexed With The Substrate Of The Reverse Reaction Fructose 6-Phosphate (Open Form) [NCBI NR]
  • gi|18158693|pdb|1FQO|A Chain A, Glucosamine 6-Phosphate Deaminase Complexed With The Substrate Of The Reverse Reaction Fructose 6-Phosphate (Open Form) [NCBI NR]
  • gi|1421345|pdb|1HOT|B Chain B, Glucosamine 6-Phosphate Deaminase Complexed With The Allosteric Activator N-Acetyl-Glucosamine-6-Phosphate [NCBI NR]
  • gi|1421344|pdb|1HOT|A Chain A, Glucosamine 6-Phosphate Deaminase Complexed With The Allosteric Activator N-Acetyl-Glucosamine-6-Phosphate [NCBI NR]
  • gi|1310881|pdb|1DEA|B Chain B, Structure And Catalytic Mechanism Of Glucosamine 6- Phosphate Deaminase From Escherichia Coli At 2.1 Angstroms Resolution [NCBI NR]
  • gi|1310880|pdb|1DEA|A Chain A, Structure And Catalytic Mechanism Of Glucosamine 6- Phosphate Deaminase From Escherichia Coli At 2.1 Angstroms Resolution [NCBI NR]
  • gi|1310838|pdb|1HOR|B Chain B, Structure And Catalytic Mechanism Of Glucosamine 6- Phosphate Deaminase From Escherichia Coli At 2.1 Angstroms Resolution [NCBI NR]
  • gi|1310837|pdb|1HOR|A Chain A, Structure And Catalytic Mechanism Of Glucosamine 6- Phosphate Deaminase From Escherichia Coli At 2.1 Angstroms Resolution [NCBI NR]
  • Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) - Escherichia coli [Swiss-Prot]
  • glucosamine-6-phosphate deaminase [Escherichia coli K12]gi|15829962|ref|NP_308735.1| glucosamine-6-phosphate deaminase [Escherichia coli O157:H7]gi|1786893|gb|AAC73772.1| glucosamine-6-phosphate deaminase [Escherichia coli K12]gi|13360166|dbj|BAB34131. [nrdb_11152004_Chlamydomonas]
  • Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase) (GlcN6P deaminase) (GNPDA) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain A, Mol_id: 1; Molecule: Glucosamine 6-Phosphate Deaminase; Chain: A, B; Ec: 5.3.1.10; Engineered: Yes; Heterogen: 2-Deoxi-2-Amino-Glucitol 6-Phosphate [nr-271106-contam.fasta]
  • Chain A, Glucosamine 6-Phosphate Deaminase Complexed With The Substrate Of The Reverse Reaction Fructose 6-Phosphate (Open Form) [nr-271106-contam.fasta]
  • Chain B, Mol_id: 1; Molecule: Glucosamine 6-Phosphate Deaminase; Chain: A, B; Ec: 5.3.1.10; Engineered: Yes; Heterogen: Inorganic Phosphate [nr-271106-contam.fasta]
  • Chain B, A Discovery Of Three Alternate Conformations In The Active Site Of Glucosamine-6-Phosphate Isomerase [nr-271106-contam.fasta]
  • Chain A, Mol_id: 1; Molecule: Glucosamine 6-Phosphate Deaminase; Chain: A, B; Ec: 5.3.1.10; Engineered: Yes; Heterogen: Inorganic Phosphate [nr-271106-contam.fasta]
  • Chain A, A Discovery Of Three Alternate Conformations In The Active Site Of Glucosamine-6-Phosphate Isomerase [nr-271106-contam.fasta]
  • Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, T Conformer, At 1.9a Resolution [nr-271106-contam.fasta]
  • Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, T Conformer, At 2.2a Resolution [nr-271106-contam.fasta]
  • Chain B, Glucosamine-6-Phosphate Deaminase From E.Coli, R Conformer. Complexed With The Allosteric Activator N-Acetyl- Glucosamine-6-Phosphate At 2.2 A Resolution [nr-271106-contam.fasta]
  • Chain B, Glucosamine 6-Phosphate Deaminase Complexed With The Substrate Of The Reverse Reaction Fructose 6-Phosphate (Open Form) [nr-271106-contam.fasta]
  • Chain A, Glucosamine 6-Phosphate Deaminase Complexed With The Allosteric Activator N-Acetyl-Glucosamine-6-Phosphate [nr-271106-contam.fasta]
  • Chain A, Glucosamine-6-Phosphate Deaminase From E.Coli, R Conformer. Complexed With The Allosteric Activator N-Acetyl- Glucosamine-6-Phosphate At 2.2 A Resolution [nr-271106-contam.fasta]
  • glucosamine-6-phosphate deaminase protein [nr-271106-contam.fasta]
  • Chain B, Mol_id: 1; Molecule: Glucosamine 6-Phosphate Deaminase; Chain: A, B; Ec: 5.3.1.10; Engineered: Yes; Heterogen: 2-Deoxi-2-Amino-Glucitol 6-Phosphate [nr-271106-contam.fasta]
  • Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain K12) GN=nagB PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIPLTTAE QVGKWAARHI VNRINAFKPT ADRPFVLGLP TGGTPMTTYK ALVEMHKAGQ  60
   61 VSFKHVVTFN MDEYVGLPKE HPESYYSFMH RNFFDHVDIP AENINLLNGN APDIDAECRQ 120
  121 YEEKIRSYGK IHLFMGGVGN DGHIAFNEPA SSLASRTRIK TLTHDTRVAN SRFFDNDVNQ 180
  181 VPKYALTVGV GTLLDAEEVM ILVLGSQKAL ALQAAVEGCV NHMWTISCLQ LHPKAIMVCD 240
  241 EPSTMELKVK TLRYFNELEA ENIKGL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. NAGB_ECOLI gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 85.69897 Glucosamine 6-phosphate deaminase/isomerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glucosamine-6-phosphate deaminase activity
    		•  4.20201419087614 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  2.15381323621148 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  1.65800801564277 bayes_pls_golite062009
  • catalytic activity
    		•  1.31732715713197 bayes_pls_golite062009
  • ribose-5-phosphate isomerase activity
    		•  1.21538742769205 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.15193795385115 bayes_pls_golite062009
  • binding
    		•  0.790197816513984 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.527142798518238 bayes_pls_golite062009
  • 6-phosphogluconolactonase activity
    		•  0.480819049634739 bayes_pls_golite062009
  • DNA binding
    		•  0.465566131334457 bayes_pls_golite062009
  • isomerase activity
    		•  0.102415560220489 bayes_pls_golite062009
  • protein binding
    		•  0.0458232930850621 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle