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Protein Overview: Nurf-38-PA

General Information:
Name(s) found: Nurf-38-PA / FBpp0072250 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene Nucleosome remodeling factor - 38kD is referred to in FlyBase by the symbol Dmel\Nurf-38 (CG4634, FBgn0016687). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20446490..20448610. It has the cytological map location 60D5. There is experimental evidence that it has the molecular function</span>: inorganic diphosphatase activity. There is experimental evidence that it is involved in the biological process</span>: ecdysone receptor-mediated signaling pathway; nucleosome mobilization; transcription; chromatin remodeling. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    cytoplasm [IDA][NAS]
    NURF complex [IDA][IPI][NAS][TAS]
    Biological Process: chromatin remodeling [IDA]
    transcription [IDA]
    ecdysone receptor-mediated signaling pathway [IGI]
    phosphate metabolic process [IEA]
    nucleosome mobilization [IDA]
    Molecular Function: magnesium ion binding [IEA]
    inorganic diphosphatase activity [IDA][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAKITRSSF YASRAVGRLS GSIPTSPAAL ASNCRYIQIE RKRTKSHEMA LYETVEKGAK  60
   61 NSPSYSLYFK NKCGNVISPM HDIPLYANEE KTIYNMVVEV PRWTNAKMEI SLKTPMNPIK 120
  121 QDIKKGKLRF VANCFPHKGY IWNYGALPQT WENPDHIEPS TGCKGDNDPI DVIEIGYRVA 180
  181 KRGDVLKVKV LGTIALIDEG ETDWKIIAID VNDPLASKVN DIADVDQYFP GLLRATVEWF 240
  241 KIYKIPDGKP ENQFAFNGDA KNADFANTII AETHKFWQNL VHQSPASGSI STTNITNRNS 300
  301 EHVIPKEEAE KILAEAPDGG QVEEVSDTVD TWHFIHLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 101.0 Inorganic pyrophosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • inorganic diphosphatase activity
    		•  2.74116819406619 bayes_pls_golite062009
  • binding
    		•  1.77492613217844 bayes_pls_golite062009
  • catalytic activity
    		•  1.33262120571864 bayes_pls_golite062009
  • protein binding
    		•  0.38607803003281 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.354425639853757 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.334860448536013 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.333575715544697 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0110854177718558 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle