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Protein Overview: gi|157169762, gi...

General Information:
Name(s) found: gi|190689809 [NCBI NR]
gi|157169762 [NCBI NR]
gi|151555505 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|190689809|gb|ACE86679.1| solute carrier family 30 (zinc transporter), member 5 protein [synthetic construct] [NCBI NR]
  • gi|157169762|gb|AAI53203.1| Solute carrier family 30 (zinc transporter), member 5 [synthetic construct] [NCBI NR]
  • gi|151555505|gb|AAI48651.1| Solute carrier family 30 (zinc transporter), member 5 [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 765 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKYGGDVL AGPGGGGGLG PVDVPSARLT KYIVLLCFTK FLKAVGLFES YDLLKAVHIV  60
   61 QFIFILKLGT AFFMVLFQKP FSSGKTITKH QWIKIFKHAV AGCIISLLWF FGLTLCGPLR 120
  121 TLLLFEHSDI VVISLLSVLF TSSGGGPAKT RGAAFFIIAV ICLLLFDNDD LMAKMAEHPE 180
  181 GHHDSALTHM LYTAIAFLGV ADHKGGVLLL VLALCCKVGF HTASRKLSVD VGGAKRLQAL 240
  241 SHLVSVLLLC PWVIVLSVTT ESKVESWFSL IMPFATVIFF VMILDFYVDS ICSVKMEVSK 300
  301 CARYGSFPIF ISALLFGNFW THPITDQLRA MNKAAHQEST EHVLSGGVVV SAIFFILSAN 360
  361 ILSSPSKRGQ KGTLIGYSPE GTPLYNFMGD AFQHSSQSIP RFIKESLKQI LEESDSRQIF 420
  421 YFLCLNLLFT FVELFYGVLT NSLGLISDGF HMLFDCSALV MGLFAALMSR WKATRIFSYG 480
  481 YGRIEILSGF INGLFLIVIA FFVFMESVAR LIDPPELDTH MLTPVSVGGL IVNLIGICAF 540
  541 SHAHSHAHGA SQGSCHSSDH SHSHHMHGHS DHGHGHSHGS AGGGMNANMR GVFLHVLADT 600
  601 LGSIGVIVST VLIEQFGWFI ADPLCSLFIA ILIFLSVVPL IKDACQVLLL RLPPEYEKEL 660
  661 HIALEKIQKI EGLISYRDPH FWRHSASIVA GTIHIQVTSD VLEQRIVQQV TGILKDAGVN 720
  721 NLTIQVEKEA YFQHMSGLST GFHDVLAMTK QMESMKYCKD GTYIM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] MSA 1.012971 View MSA. No confident structure predictions are available.
    2 View Details [101..170] deduced N/A No confident structure predictions are available.
    3 View Details [171..393] MSA 1.043964 View MSA. No confident structure predictions are available.
    4 View Details [394..765] PSI-BLAST 47.69897 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  6.60087208506814 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.49419690808578 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  6.066906606566 bayes_pls_golite062009
  • transporter activity
    		•  4.27173462293249 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.19993137135137 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.18558383943492 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  3.30217266286364 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  2.65640147236 bayes_pls_golite062009
  • cation channel activity
    		•  2.58631873778428 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.32644140472297 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.19343183150052 bayes_pls_golite062009
  • ion channel activity
    		•  2.03125515494926 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.95530036989194 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.95111816239105 bayes_pls_golite062009
  • channel activity
    		•  1.95111816239105 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.31663166812163 bayes_pls_golite062009
  • binding
    		•  1.27456652114636 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  0.661906409169955 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.376948884172728 bayes_pls_golite062009
  • protein binding
    		•  0.311357063667067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle