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Protein Overview: gi|151942400

General Information:
Name(s) found: gi|151942400 [NCBI NR]
Description(s) found:
  • gi|151942400|gb|EDN60756.1| metalloprotease [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 989 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFQRFASS YAQAQAVRKY PVGGIFHGYE VRRILPVPEL RLTAVDLVHS QTGAEHLHID  60
   61 RDDKNNVFSI AFKTNPPDST GVPHILEHTT LCGSVKYPVR DPFFKMLNKS LANFMNAMTG 120
  121 PDYTFFPFST TNPQDFANLR GVYLDSTLNP LLKQEDFDQE GWRLEHKNIT DPESNIVFKG 180
  181 VVYNEMKGQI SNANYYFWSK FQQSIYPSLN NSGGDPMKIT DLRYGDLLDF HHKNYHPSNA 240
  241 KTFTYGNLPL VDTLKQLNEQ FSGYGKRARK DKLLMPIDLK KDIDVKLLGQ IDTMLPPEKQ 300
  301 TKASMTWICG APQDTYDTFL LKVLGNLLMD GHSSVMYQKL IESGIGLEFS VNSGVEPTTA 360
  361 VNLLTVGIQG VSDIEIFKDT VNNIFQNLLE TEHPFDRKRI DAIIEQLELS KKDQKADFGL 420
  421 QLLYSILPGW TNKIDPFESL LFEDVLQRFR GDLETKGDTL FQDLIRKYIV HKPCFTFSIQ 480
  481 GSEEFSKSLD DEEQTRLREK ITALDEQDKK NIFKRGILLQ EKQNEKEDLS CLPTLQIKDI 540
  541 PRAGDKYSIE QKNNTMSRIT DTNGITYVRG KRLLNDIIPF ELFPYLPLFA ESLTNLGTTT 600
  601 ESFSEIEDQI KLHTGGISTH VEVTSDPNTT EPRLIFGFDG WSLNSKTDHI FEFWSKILLE 660
  661 TDFHKNSDKL KVLIRLLASS NTSSVADAGH AFARGYSAAH YRSSGAINET LNGIEQLQFI 720
  721 NRLHSLLDNE ETFQREVVDK LTELQKYIVD TNNMNFFITS DSDVQAKTVE SQISKFMERL 780
  781 PHGSCLPNGP KTSDYPLIGS KCKHTLIKFP FQVHYTSQAL LGVPYTHKDG SALQVMSNML 840
  841 TFKHLHREVR EKGGAYGGGA SYSALAGIFS FYSYRDPQPL KSLETFKNSG RYILNDAKWG 900
  901 VTDLDEAKLT IFQQVDAPKS PKGEGVTYFM SGVTDDMKQA RREQLLDVSL LDVHRVAEKY 960
  961 LLNKEGVSTV IGPGIEGKTV SPNWEVKEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190]
    [209..277]
    [413..447]    		 PSI-BLAST 91.69897 Cytochrome bc1 core subunit 1
    2 View Details [191..208]
    [278..412]
    [448..532]    		 PSI-BLAST 91.69897 Cytochrome bc1 core subunit 1
    3 View Details [533..698]
    [723..792]    		 PSI-BLAST 19.0 Cytochrome bc1 core subunit 2
    4 View Details [699..722]
    [793..916]    		 PSI-BLAST 19.0 Cytochrome bc1 core subunit 2
    5 View Details [917..989] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • metalloendopeptidase activity
    		•  3.72038852665442 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.60100837479757 bayes_pls_golite062009
  • peptidase activity
    		•  3.59435865021473 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.51928093329287 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.00607833553933 bayes_pls_golite062009
  • hydrolase activity
    		•  2.42559068821325 bayes_pls_golite062009
  • catalytic activity
    		•  1.30647052031202 bayes_pls_golite062009
  • binding
    		•  0.820758410659358 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle