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Protein Overview: DEOR_ECOLI

General Information:
Name(s) found: DEOR_ECOLI [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Deoxyribose operon repressor - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRREERIG QLLQELKRSD KLHLKDAAAL LGVSEMTIRR DLNNHSAPVV LLGGYIVLEP  60
   61 RSASHYLLSD QKSRLVEEKR RAAKLAATLV EPDQTLFFDC GTTTPWIIEA IDNEIPFTAV 120
  121 CYSLNTFLAL KEKPHCRAFL CGGEFHASNA IFKPIDFQQT LNNFCPDIAF YSAAGVHVSK 180
  181 GATCFNLEEL PVKHWAMSMA QKHVLVVDHS KFGKVRPARM GDLKRFDIVV SDCCPEDEYV 240
  241 KYAQTQRIKL MY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] FFAS03 2.21 Putative transcriptional regulator TM1602, N-terminal domain; Putative transcriptional regulator TM1602, C-terminal domain
    2 View Details [67..252] PSI-BLAST 11.69897 No description for 2pjmA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.67519658226073 bayes_pls_golite062009
  • DNA binding
    		•  3.1229077545522 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.10431747895367 bayes_pls_golite062009
  • transcription factor activity
    		•  2.49694475728018 bayes_pls_golite062009
  • binding
    		•  2.03697617454396 bayes_pls_golite062009
  • transcription activator activity
    		•  0.293284204935948 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.266645609122554 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.259857063944388 bayes_pls_golite062009
  • protein binding
    		•  0.00796693091603284 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle