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Protein Overview: CYBH_ECOLI

General Information:
Name(s) found: CYBH_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|77416676|sp|P0AAM1.1|CYBH_ECOLI RecName: Full=Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit [NCBI NR]
  • pir||BVECYC hydrogenase (EC 1.18.99.1) (NiFe) b-type cytochrome chain - Escherichia coli (strain K-12) [NCBI NR]
  • pir||F85632 hydrogenase (EC 1.18.99.1) (NiFe) b-type cytochrome chain - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||B90770 hydrogenase (EC 1.18.99.1) (NiFe) b-type cytochrome chain - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209774286|gb|ACI85455.1| probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit [Escherichia coli] [NCBI NR]
  • gi|209774284|gb|ACI85454.1| probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit [Escherichia coli] [NCBI NR]
  • gi|209774282|gb|ACI85453.1| probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit [Escherichia coli] [NCBI NR]
  • gi|209774280|gb|ACI85452.1| probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit [Escherichia coli] [NCBI NR]
  • gi|209774278|gb|ACI85451.1| probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit [Escherichia coli] [NCBI NR]
  • gi|146422|gb|AAA23999.1| hyaC protein [NCBI NR]
  • Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit - Escherichia coli [Swiss-Prot]
  • probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; putative Ni/Fe-hydrogenase, 1 b-type cytochrome subunit [Escherichia coli K12]gi|15830384|ref|NP_309157.1| putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit [Escherichia coli O157:H7]gi|158008 [nrdb_11152004_Chlamydomonas]
  • Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • hyaC protein [nr-271106-contam.fasta]
  • Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit OS=Escherichia coli (strain K12) GN=hyaC PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQKSDNVVS HYVFEAPVRI WHWLTVLCMA VLMVTGYFIG KPLPSVSGEA TYLFYMGYIR  60
   61 LIHFSAGMVF TVVLLMRIYW AFVGNRYSRE LFIVPVWRKS WWQGVWYEIR WYLFLAKRPS 120
  121 ADIGHNPIAQ AAMFGYFLMS VFMIITGFAL YSEHSQYAIF APFRYVVEFF YWTGGNSMDI 180
  181 HSWHRLGMWL IGAFVIGHVY MALREDIMSD DTVISTMVNG YRSHKFGKIS NKERS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] PSI-BLAST 20.522879 Formate dehydrogenase N, cytochrome (gamma) subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  4.29455986972274 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  4.14658254808421 bayes_pls_golite062009
  • ubiquinol-cytochrome-c reductase activity
    		•  3.64153536514168 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  3.64153536514168 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  3.50341532760587 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.24971217721974 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  3.24610027021932 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.0416933490072 bayes_pls_golite062009
  • electron carrier activity
    		•  2.51878542975969 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.7836019763102 bayes_pls_golite062009
  • formate dehydrogenase activity
    		•  1.59045445940899 bayes_pls_golite062009
  • catalytic activity
    		•  1.19342057724506 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.173080554590997 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  0.146687943468395 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0890676728517352 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  0.0525552238787478 bayes_pls_golite062009
  • binding
    		•  0.00724604692107611 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle