YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYBH_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQKSDNVVS HYVFEAPVRI WHWLTVLCMA VLMVTGYFIG KPLPSVSGEA TYLFYMGYIR  60
   61 LIHFSAGMVF TVVLLMRIYW AFVGNRYSRE LFIVPVWRKS WWQGVWYEIR WYLFLAKRPS 120
  121 ADIGHNPIAQ AAMFGYFLMS VFMIITGFAL YSEHSQYAIF APFRYVVEFF YWTGGNSMDI 180
  181 HSWHRLGMWL IGAFVIGHVY MALREDIMSD DTVISTMVNG YRSHKFGKIS NKERS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.96
Transmembrane Helix	20	40	0.96
Non-Cytoplasmic	41	60	0.87
Transmembrane Helix	61	81	0.95
Cytoplasmic	82	131	0.90
Transmembrane Helix	132	151	0.92
Non-Cytoplasmic	152	180	0.84
Transmembrane Helix	181	202	0.89
Cytoplasmic	203	235	0.88