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Protein Overview: him-8

General Information:
Name(s) found: him-8 / CE36715 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00001867 locus:him-8 status:Partially_confirmed UniProt:O18068 protein_id:CAB05281.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    X chromosome [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGNSLNSFV NIRIYGKTLE NLKHYGLIEY LNEFAGGSSF VSLTESTSIS SINTATVDTP  60
   61 RFSTPIVPNV GLYQKFTLNL SEKISEIGPN DENEDLKESY DQEPEEELNS SHESNNSVEK 120
  121 VMDMIIEDVV SNHTTNIADG DDINSPIVSS GQSEFLQDGV DNDGNIDDYE EYQSLPPNDD 180
  181 VIMNETELMD VDRTTVMTPL RSPTFFDYHN ESGDEDQLNE NEMKSPDSKN DEINKDEIHN 240
  241 IQCHFPNCNR AIAWKRKYGK LRLIDHALVH CDKNFLKCKK CKHTCHTIRQ MRYHYRIFHS 300
  301 TSKMEGFGVS GLPTKNKGFQ KIMNACFADQ LVEMNKRKNP PKSQNGSRRS RVKSKSKRSG 360
  361 I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] deduced N/A No confident structure predictions are available.
    2 View Details [73..279] PSI-BLAST 46.154902 No description for 2i13A was found.
    3 View Details [280..361] PSI-BLAST 16.154902 Five-finger GLI1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.33104470146352 bayes_pls_golite062009
  • DNA binding
    		•  0.750106478442632 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.393163105327437 bayes_pls_golite062009
  • protein binding
    		•  0.309302474986083 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.130445238810851 bayes_pls_golite062009
  • transcription factor activity
    		•  9.32354595580165E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle