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Protein Overview: mys-3

General Information:
Name(s) found: mys-3 / CE37037 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00011085 locus:mys-3 zinc finger protein status:Partially_confirmed UniProt:Q6BET6 protein_id:CAH04717.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: positive regulation of vulval development [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSNDQSEIA KRPRTPRPRY SPEAQRRTNS RLSALTIDTN RSNDLNVDGS APSSSSAASC  60
   61 GLSTPDPDRT SQQRRKGNQS AARSRKIKTP SPPLSQEDEP MELDSDDDPV NELDNLPIVI 120
  121 DDPSYVLTKE HKEIFEQVKK SVSDRNEFSP AQISEIYRSS KGEQARLPER IHFGAFIMKT 180
  181 WYGSPFPAEF INVKKLFICE FCFFYARSDE IMQNHAKKCM LRAPPGLEIY RKGDISVFEV 240
  241 DGRLQKEYCQ TLCLVSRMFL ESKTVFYDTE PFFFYIVTIN DDIGCHFAGY FSKEKYEPDV 300
  301 NNLSCIMTLP CYQEMGLGRF LIDISYALSR KEKWFGGPEQ PLSELGRKAY GGYWRTTIAS 360
  361 CLGRLKDELE FGSGISIKMI ADDTGVNCHD ILEVVCSLGW AKPVDPDEKN HYKLEWDVDW 420
  421 DMVSIILRES EASKETKVQY DPECLDWVPR KMRPSMDGYH ELSKEEIEQD EQRRKSIQKT 480
  481 PVHVSMEKAT PTSTTSLPVG SVKKELRSRG HNRSVGRNLK HEVNRKVKVP EWAAARDLTD 540
  541 EEITVEENKK QQKQNRKIFT RCAGMSERVN IYSSSLEKFV GHF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] PSI-BLAST 10.39794 Solution Structure of the Tudor Domain from Mouse Hypothetical Protein Homologous to Histone Acetyltransferase
    2 View Details [98..453] PSI-BLAST 116.0 No description for 2ozuA was found.
    3 View Details [454..583] MSA 1.038988 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.52947930150666 bayes_pls_golite062009
  • protein binding
    		•  0.79852803292134 bayes_pls_golite062009
  • chromatin binding
    		•  0.59406059827838 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.13486860077524 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle