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Protein Overview: trr-1

General Information:
Name(s) found: trr-1 / CE36692 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00007028 locus:trr-1 status:Confirmed UniProt:G5EEV2 protein_id:CAA93765.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 4064 amino acids

    Gene Ontology:
    Cellular Component: condensed chromosome [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    histone acetyltransferase complex [ISSLink to PubMed article]
    Biological Process: negative regulation of vulval development [IGILink to PubMed article][IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]
    phosphotransferase activity, alcohol group as acceptor [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPAMASPGY RSVQSDRSNH LTELETRIQN LADNSQRDDV KLKMLQEIWS TIENHFTLSS  60
   61 HEKVVERLIL SFLQVFCNTS PQFIAENNTQ QLRKLMLEII LRLSNVEAMK HHSKEIIKQM 120
  121 MRLITVENEE NANLAIKIVT DQGRSTGKMQ YCGEVSQIMV SFKTMVIDLT ASGRAGDMFN 180
  181 IKEHKAPPST SSDEQVITEY LKTCYYQQTV LLNGTEGKPP LKYNMIPSAH QSTKVLLEVP 240
  241 YLVIFFYQHF KTAIQTEALD FMRLGLDFLN VRVPDEDKLK TNQIITDDFV SAQSRFLSFV 300
  301 NIMAKIPAFM DLIMQNGPLL VSGTMQMLER CPADLISVRR EVLMALKYFT SGEMKSKFFP 360
  361 MLPRLIAEEV VLGTGFTAIE HLRVFMYQML ADLLHHMRNS IDYEMITHVI FVFCRTLHDP 420
  421 NNSSQVQIMS ARLLNSLAES LCKMDSHDTF QTRDLLIEIL ESHVAKLKTL AVYHMPILFQ 480
  481 QYGTEIDYEY KSYERDAEKP GMNIPKDTIR GVPKRRIRRL SIDSVEELEF LASEPSTSED 540
  541 ADESGGDPNK LPPPTKEGKK TSPEAILTAM STMTPPPLAI VEARNLVKYI MHTCKFVTGQ 600
  601 LRIARPSQDM YHCSKERDLF ERLLRYGVMC MDVFVLPTTR NQPQMHSSMR TKDEKDALES 660
  661 LANVFTTIDH AIFREIFEKY MDFLIERIYN RNYPLQLMVN TFLVRNEVPF FASTMLSFLM 720
  721 SRMKLLEVSN DKTMLYVKLF KIIFSAIGAN GSGLHGDKML TSYLPEILKQ STVLALTARE 780
  781 PLNYFLLLRA LFRSIGGGAQ DILYGKFLQL LPNLLQFLNK LTNLQSCQHR IQMRELFVEL 840
  841 CLTVPVRLSS LLPYLPLLMD PLVCAMNGSP NIVTQGLRTL ELCVDNLQPE YLLENMLPVR 900
  901 GALMQGLWRV VSKAPDTSSM TAAFRILGKF GGANRKLLNQ PQILQVATLG DTVQSYINME 960
  961 FSRMGLDGNH SIHLPLSELM RVVADQMRYP ADMILNPSPA MIPSTHMKKW CMELSKAVLL1020
 1021 AGLGSSGSPI TPSANLPKII KKLLEDFDPN NRTTEVYTCP RESDRELFVN ALLAMAYGIW1080
 1081 NKDGFRHVYS KFFIKVLRQF ALIGVLEYIG GNGWMRHAEE EGVLPLCLDS SVMVDALIIC1140
 1141 LSETSSSFII AGVMSLRHIN ETLSLTLPDI DQMSKVPMCK YLMEKVFKLC HGPAWYARSG1200
 1201 GINAIGYMIE SFPRKFVMDF VIDVVDSIME VILGTVEEIS SGSADSAYDC LKKMMRVYFI1260
 1261 KEEGQEEENL TLATIFVSAI SKHYFHSNER VREFAIGLMD HCMVHSRLAP SLDKFYYRFK1320
 1321 EFFEPELMRV LTTVPTMSLA DAGGSLDGVQ NYMFNCPDGF DFEKDMDMYK RYLSHLLDIA1380
 1381 QTDTFTLNQR NAFKKCETCP SHFLPPFPIT THIDSMRASA LQCLVIAYDR MKKQYIDKGI1440
 1441 ELGDEHKMIE ILALRSSKIT VDQVYESDES WRRLMTVLLR AVTDRETPEI AEKLHPSLLK1500
 1501 VSPISTIIIA TFGASYIRNI SGAGDDSDSD RHISYNDIMK FKCLVELNPK ILVTKMAVNL1560
 1561 ANQMVKYKMS DKISRILSVP SSFTEEELDD FEAEKMKGIR ELDMIGHTVK MLAGCPVTTF1620
 1621 TEQIIVDISR FAAHFEYAYS QDVLVNWIDD VTVILNKSPK DVWKFFLSRE SILDPARRSF1680
 1681 IRRIIVYQSS GPLRQEFMDT PEYFEKLIDL DDEENKDEDE RKIWDRDMFA FSIVDRISKS1740
 1741 CPEWLISPNS PIPRIKKLFS ETEFNERYVV RALTEVKKFQ EEIIVKRMTE HKYKVPKLIL1800
 1801 NTFLRYLRLN IYDYDLFIVI ASCFNGNFVT DLSFLREYLE TEVIPKVPLQ WRRELFLRIM1860
 1861 QKFDTDPQTA GTSMQHVKAL QYLVIPTLHW AFERYDTDEI VGTAPIDDSD SSMDVDPAGS1920
 1921 SDNLVARLTS VIDSHRNYLS DGMVIVFYQL CTLFVQNASE HIHNNNCKKQ GGRLRILMLF1980
 1981 AWPCLTMYNH QDPTMRYTGF FFLANIIERF TINRKIVLQV FHQLMTTYQQ DTRDQIRKAI2040
 2041 DILTPALRTR MEDGHLQILS HVKKILIEEC HNLQHVQHVF QMVVRNYRVY YHVRLELLTP2100
 2101 LLNGVQRALV MPNSVLEKFS WQTRRHAVEI CEMVIKWELF RTLKTDHIIS DEEALEVDKQ2160
 2161 LDKLRTASST DRFDFEEAHN KRDMPDAQRT IIKEHADVIV NMLVRFCMTF HQNSGSSSTS2220
 2221 QSGNHGVELT KKCQLLLRAA LRPSMWGEFV SFRLTMIEKF LSIPNDNALR NDISSTAYAN2280
 2281 TIQNAQHTLD MLCNIIPVMP KTSLMTMMRQ LQRPLIQCLN NGAQNFKMTR LVTQIVSRLL2340
 2341 EKTNVSVNGL DELEQLNQYI SRFLHEHFGS LLNCRNLSGP VLGVLGAFSL LRTICGHEPA2400
 2401 YLDHLMPSFV KVMERAAKEH LAYVANSQDG NMVKNFFPDV AELLCACMEL VRPRVDHISM2460
 2461 EIKRSIVGGI IAELIIKSNH DKIIQTSVKL LGAMISTQDM EFTILTVLPL LVRIQSIIVT2520
 2521 KFKNCKDLIA DYLVVVITVF ENSEYRNSEA GSRLWEGFFW GLKSSDPQTR EKFSIVWEKT2580
 2581 WPHMATVDIA HRMKYIMQNQ DWSKFKHAFW LKFALWGMLR TIAKRPTDPN NKRKKVILLN2640
 2641 CATPWRTIEY AAKLKDQPME VETEMKREEP EPMEVDEKDS QDDSKDAGEP KEKEKLTLEL2700
 2701 LLAGQQELLD EASNYDFADA LDTVSQITFA LNENQVTSKM WVVLFKSFWS SLSQSEIEDF2760
 2761 TALVVPFMSS GVHNNYQTGV QDSVLAVWLE AVGDAVHLPS RLIEFISSKH ECWHTGIRLL2820
 2821 ENHIWTIPKQ LNNTLLREMK VAPGLAGDIE TLESLGTLYN EISEFDQFAA IWERRAVFPD2880
 2881 TMRAMSAMQL GDMELAQSYL EKSMSSTYET LAPTINPNNT SNSEKHVSPI IDKEYDHWME2940
 2941 MYITNCSELL QWQNVADVCN GKDMQHVRGL INAASHIPDW NVVEECKSQI AGCIPPSFHL3000
 3001 DYTLFNLMST VMRMNENSSP THMKERCKIA IQECTEAHIS RWRALPSVVS YGHVKILQAM3060
 3061 NLVREIEEST DIRIALLEAP SNKVDQALMG DMKSLMKVFR NRTPTTSDDM GFVSTWYDWR3120
 3121 NQIHGMMLQR FEYWDKVGLN VAATGNQSIV PIHSMAQAQL AVAKHAKNLG FHNLTKDLLN3180
 3181 KLAGLTAIPM MDAQDKVCTY GKTLRDMANS AADERVKNEL LCEALEVLED VRIDDLQKDQ3240
 3241 VAALLYHRAN IHSVLDQAEN ADYTFSAASQ LVDLQNSVTT TGIKLMKNWG HHLYKRFFST3300
 3301 TVCKETGNNF GRQALACYFI AARVDNDIKA RKPIAKILWL SKHLNACGSH EVMNRVIKKQ3360
 3361 LHSLNLFNWL YWLPQLVTDV RYKPNSNFVL ILCKMAAAHP LQVFYHIREA VSVDDIDSVL3420
 3421 EEDYTDEQMS MDVSDEDCFA DDPPFDRILK ICLKYRPTDI RVFHRVLKEL DEMNETWVER3480
 3481 HLRHAICLKD QMFKDFSEQM DATFNEMQYS EDVTMMTLRW RKQLEEDLVY FQQNYNLDFL3540
 3541 EIRNKRKMIV TKGCMGVEKS QIMFEKELSQ VFTEPAGMQD EFDFVTNMTN MMVSQLDIHA3600
 3601 VDAPRPQGYI RIVLDWIRAI RRRFDRLPRR IPLESSSPYL ARFSHRTGCI EMPYDLLNVL3660
 3661 RAKNHTLMAS NQTGQYISML SRFEPNFEIV IKGGQVIRKI YIRGQTGKSA AFYLKKSVQD3720
 3721 EPTNRVPQMF KHLDHVLQTD RESARRHLHA PTVLQMRVGQ KTTLYEVASV QPYAMPPDCT3780
 3781 RNYPASQIDI VHPYDVLTAT FNGSYYPDDM VLHFFERFAQ SSSSIGQPLP TPTNQDGTVA3840
 3841 PPRLTEAHHI KNIIYEDFAR DMIPFRLLYD YLTARYPDPV MYYAMKKQLL HSLAVLSTIE3900
 3901 YHCNLTPMGP DQMMMTMNTG VLSNPSYRFE IRGGRSLHDI QHFGHEVPFR LTPNLSILVG3960
 3961 VAQDGDLLWS MAAASKCLMK KEPEVIMRPL VWDEFANNTD CDKSRLQVFA CHASNSYING4020
 4021 VASKLRNTNS ADAKLRKDDC VSLISRAKDS DNLARMPPTY HAWF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle