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Protein Overview: TMA23

General Information:
Name(s) found: TMA23 / YMR269W [SGD]
Description(s) found:
Found 19 descriptions.
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  • Nucleolar protein of unknown function implicated in ribosome biogenesis; TMA23 may be a fungal-specific gene as no homologs have been yet identified in higher eukaryotes [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 211 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDALink to PubMed article]
    ribosome [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [NDLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKEYLISY GWKEGEAFRE GGLKRPILVK HKRDKKGLGN APGGNDGEAW WERLFDGHLK  60
   61 NLDVSTDSNN GSIKFTQNEA VATAVSKSSS PLYRWFVKGE GLKGTITNLG KKEEASFVVS 120
  121 SASSSKGKKR RRRDEDDNKV KRKKLKKDKK TSNDSESKKK KKKKSKKESK KGKKSKHSSD 180
  181 EGDKSKHKKS KKSKKHKKEE SSARRDRKEH I

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) RRP15 TMA23

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen TMA23 RET3 2 Unpublished Fields Lab Data
    View Screen IMP4 TMA23 2 Unpublished Fields Lab Data
    View Screen YJL147C TMA23 2 Unpublished Fields Lab Data
    View Screen ARF3 TMA23 2 Unpublished Fields Lab Data
    View Screen TMA23 TMA23 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data TMA23 and NOP56 Huh WK, et al. (2003)
    View Data TMA23 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] MSA 17.051997 View MSA. No confident structure predictions are available.
    2 View Details [65..211] MSA 4.045996 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle