Protein Overview: YJL160C

General Information:
Name(s) found:	YJL160C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|97537741\|sp\|P46999.2\|PIR5_YEAST RecName: Full=Cell wall protein PIR5; AltName: Full=Protein with internal repeats 5; Flags: Precursor [NCBI NR] gi\|42742254\|ref\|NP_012375.2\| Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosi [NCBI NR] Uncharacterized protein YJL160C OS=Saccharomyces cerevisiae GN=YJL160C PE=2 SV=2 [Swiss-Prot] Cell wall protein PIR5 OS=Saccharomyces cerevisiae GN=PIR5 PE=2 SV=2 [Swiss-Prot] Protein involved in sporulation [mips] Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis [SGD] YJL160C SGDID:S0003696, Chr X from 118820-117957, reverse complement, Uncharacterized ORF [yeastflysequest.fasta] Yjl160cp [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas] YJL160C SGDID:S000003696, Chr X from 118820-117957, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YJL160C SGDID:S000003696, Chr X from 118821-117958, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sp [yeast-contam.fasta] Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis; Yjl160cp [Saccharomyces ce [nr-271106-contam.fasta] Uncharacterized protein YJL160C precursor [nr-271106-contam.fasta] YJL160C SGDID:S000003696, Chr X from 118821-117958, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis" [yeast-bovrabprots.fasta] [chemostatdb.fasta] Cell wall protein PIR5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIR5 PE=2 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YJL160C SGDID:S000003696, Chr X from 118825-117962, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis" [yeast-030211-contam.fasta] YJL160C SGDID:S000003696, Chr X from 118825-117962, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis; YJL160C has a paralog, PIR1, that arose from the whole genome duplication" [20141208_orf_trans.fasta] TR6540\|c0_g1_i1\|g.4632 ORF TR6540\|c0_g1_i1\|g.4632 TR6540\|c0_g1_i1\|m.4632 type:complete len:288 (+) TR6540\|c0_g1_i1:326-1189(+) [Y12_S_cerevisiae-Sep2015-contam.fasta] asmbl_5231\|g.3877 ORF asmbl_5231\|g.3877 asmbl_5231\|m.3877 type:complete len:288 (+) asmbl_5231:316-1179(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta] ID=asmbl_5234\|g.3230 ORF ID=asmbl_5234\|g.3230 ID=asmbl_5234\|m.3230 type:complete len:288 (+) ID=asmbl_5234:317-1180(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
Organism:	Saccharomyces cerevisiae
Length:	287 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYKKAFLAS LLSSIALTAY APPEPWATLT PSSKMDGGTT EYRTSFGLAV IPFTVTESKV  60
   61 KRNVISQIND GQVQVTTQKL PHPVSQIGDG QIQVTTQKVP PVVSHIVSQI GDGQLQITTA 120
  121 KNVVTKSTIA VPSKTVTATA TSTATAVSQI HDGQVQVTIS SASSSSVLSK SKLEPTKKPN 180
  181 NEKVIKVQAC KSSGTLAITL QGGVLIDSSG RIGSIVANRQ FQFDGPPPQA GAIYAGGWSI 240
  241 TKHGTLAIGD NDVFYQCLSG TFYNLYDQSI GGQCNPVHLQ TVGLVDC

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	MLP2	#19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment	Keck JM, et al. (2011)
View Run	MLP2	#25 Asynchronous Prep3-TiO2 Flowthrough	Keck JM, et al. (2011)
View Run	MLP2	#34 Asynchronous SPB prep	Keck JM, et al. (2011)
View Run	MLP2	#32 Asynchronous Prep-No Phosphopeptide enrichment	Keck JM, et al. (2011)
View Run	MLP2	#04 Alpha Factor Prep2	Keck JM, et al. (2011)
View Run	MLP2	#19b Asynchronous Prep1-new search criteria	Keck JM, et al. (2011)
View Run	MLP2	#19a Asynchronous Prep1-new search criteria	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	CNB1	YJL160C	1	Unpublished Fields Lab Data
View Screen	YKU80	YJL160C	1	Unpublished Fields Lab Data
View Screen	ILM1	YJL160C	1	Lockshon D, et al. (2006)
View Screen	RAD51	YJL160C	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..121]	deduced	N/A	No confident structure predictions are available.
2	View Details	[122..287]	MSA	12.031981	View MSA. No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2