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Protein Overview: EF1G2_ARATH

General Information:
Name(s) found: EF1G2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79320145|ref|NP_001031202.1| elongation factor 1B-gamma, putative / eEF-1B gamma, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||E96611 probable elongation factor 1B gamma [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|24030437|gb|AAN41373.1| putative elongation factor 1B gamma [Arabidopsis thaliana] [NCBI NR]
  • gi|21553395|gb|AAM62488.1| elongation factor 1B gamma, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|21360471|gb|AAM47351.1| At1g57720/T8L23_18 [Arabidopsis thaliana] [NCBI NR]
  • gi|17978699|gb|AAL47343.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16226841|gb|AAL16277.1|AF428347_1 At1g57720/T8L23_18 [Arabidopsis thaliana] [NCBI NR]
  • gi|15983511|gb|AAL11623.1|AF424630_1 At1g57720/T8L23_18 [Arabidopsis thaliana] [NCBI NR]
  • gi|15223649|ref|NP_176084.1| elongation factor 1B-gamma, putative / eEF-1B gamma, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|13877603|gb|AAK43879.1|AF370502_1 Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13626393|sp|Q9FVT2.1|EF1G2_ARATH RecName: Full=Probable elongation factor 1-gamma 2; Short=EF-1-gamma 2; AltName: Full=eEF-1B gamma 2 [NCBI NR]
  • gi|12321359|gb|AAG50755.1|AC079733_23 elongation factor 1B gamma, putative; tRNA-Undet [Arabidopsis thaliana] [NCBI NR]
  • (Q9FVT2) Probable elongation factor 1-gamma 2 (EF-1-gamma) (eEF-1B gamma) [Swiss-Prot]
  • Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1 [Swiss-Prot]
  • (AAG50755) Elongation factor 1B gamma, putative [athaliana3702.FASTAC.txt]
  • elongation factor 1B gamma, putative; tRNA-Undet [Arabidopsis thaliana]gi|24030437|gb|AAN41373.1| putative elongation factor 1B gamma [Arabidopsis thaliana]gi|21553395|gb|AAM62488.1| elongation factor 1B gamma, putative [Arabidopsis thaliana]gi|2136047 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable elongation factor 1-gamma 2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | elongation factor 1B-gamma, putative / eEF-1B gamma, putative | chr1:21381538-21383779 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Probable elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) [nr-271106-contam.fasta]
  • elongation factor 1B gamma, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • translation elongation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g57720/T8L23_18 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative elongation factor 1B gamma [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • elongation factor 1B gamma, putative; tRNA-Undet [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Translation elongation factor EF1B, gamma chain | chr1:21377873-21380114 FORWARD LENGTH=413 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 413 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    membrane [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: response to zinc ion [IEP]
    response to cadmium ion [IEP]
    Molecular Function: copper ion binding [IDA]
    translation elongation factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP  60
   61 EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF SSLEIDANML KWFAPRMGYA 120
  121 PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT 180
  181 SAFPHVERYF WTMVNQPEFK KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP 240
  241 KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL 300
  301 WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE 360
  361 IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP FEGEALLDAK CFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 44.522879 STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
    2 View Details [215..413] PSI-BLAST 69.522879 Elongation factor 1-gamma C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.30799114442278 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.06381591939564 bayes_pls_golite062009
  • DNA binding
    		•  1.92118545500784 bayes_pls_golite062009
  • binding
    		•  1.25802922431343 bayes_pls_golite062009
  • transcription activator activity
    		•  1.23146660729357 bayes_pls_golite062009
  • protein binding
    		•  1.18479617596618 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • RNA binding
    		•  0.382017633056715 bayes_pls_golite062009
    		• 0.359224524631956 bayes_pls_golite062009
  • receptor binding
    		•  0.0497559408754589 bayes_pls_golite062009
    2
    Term Confidence Notes
  • translation elongation factor activity
    		•  11.9602302019768 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  7.4644014407268 bayes_pls_golite062009
  • translation regulator activity
    		•  7.42485540728491 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.9329721501879 bayes_pls_golite062009
  • binding
    		•  3.0325775548747 bayes_pls_golite062009
  • protein binding
    		•  1.65598815428763 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle