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Protein Overview: ABI4_ARATH

General Information:
Name(s) found: ABI4_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: sugar mediated signaling pathway [TAS]
    response to osmotic stress [IMP]
    regulation of transcription, DNA-dependent [ISS][TAS]
    seed development [IMP]
    hexokinase-dependent signaling [NAS]
    starch catabolic process [NAS]
    response to water deprivation [IMP]
    response to sucrose stimulus [IEP]
    abscisic acid mediated signaling pathway [IMP]
    response to glucose stimulus [IMP]
    response to abscisic acid stimulus [NAS]
    triglyceride catabolic process [IMP]
    mitochondria-nucleus signaling pathway [IDA]
    response to trehalose stimulus [IMP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [ISS][TAS]
    promoter binding [IDA]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ  60
   61 RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY LYGSRAQLNL TPSSPSSVSS 120
  121 SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC 180
  181 PSYGFFPQQQ QQQNQMVQMG QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA 240
  241 LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI 300
  301 WPFGGEEEYS HNWGSIWDFI DPILGEFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] PSI-BLAST 25.09691 GCC-box binding domain
    2 View Details [135..328] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle