| Protein: | ABI4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABI4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..2] | [328..56] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ 60
61 RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY LYGSRAQLNL TPSSPSSVSS 120
121 SSSSVSAASS PSTS
|
| Detection Method: |  |
| Confidence: | 25.09691 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [135-328] |
1 11 21 31 41 51
| | | | | |
1 SSSTQTLRPL LPRPAAATVG GGANFGPYGI PFNNNIFLNG GTSMLCPSYG FFPQQQQQQN 60
61 QMVQMGQFQH QQYQNLHSNT NNNKISDIEL TDVPVTNSTS FHHEVALGQE QGGSGCNNNS 120
121 SMEDLNSLAG SVGSSLSITH PPPLVDPVCS MGLDPGYMVG DGSSTIWPFG GEEEYSHNWG 180
181 SIWDFIDPIL GEFY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
