Protein: | ABI4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 328 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABI4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
251.0 | [0..2] | [328..56] |
Region A: Residues: [1-134] |
1 11 21 31 41 51 | | | | | | 1 MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ 60 61 RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY LYGSRAQLNL TPSSPSSVSS 120 121 SSSSVSAASS PSTS |
Detection Method: | |
Confidence: | 25.09691 |
Match: | 1gccA |
Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.339357445627225 | bayes_pls_golite062009 |
Region A: Residues: [135-328] |
1 11 21 31 41 51 | | | | | | 1 SSSTQTLRPL LPRPAAATVG GGANFGPYGI PFNNNIFLNG GTSMLCPSYG FFPQQQQQQN 60 61 QMVQMGQFQH QQYQNLHSNT NNNKISDIEL TDVPVTNSTS FHHEVALGQE QGGSGCNNNS 120 121 SMEDLNSLAG SVGSSLSITH PPPLVDPVCS MGLDPGYMVG DGSSTIWPFG GEEEYSHNWG 180 181 SIWDFIDPIL GEFY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.