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Protein Overview: MCA6_ARATH

General Information:
Name(s) found: MCA6_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: proteolysis [IEA]
    Molecular Function: cysteine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKALLIGI NYVGTKAELR GCVNDVRRMR ISLVERYGFS EENIKMLIDT DSSSIKPTGK  60
   61 NIRQALLDLV EPAKSGDVLF VHYSGHGTRL PAETGEDDDT GYDECIVPSD MNLITDDDFR 120
  121 DLVDMVPKDC PITIISDSCH SGGLIDEAKE QIGESTKKKK DSGDSSTINK ETEAEIIEVG 180
  181 NRSLPLETLI DMLKQETGND DIEVGKIRTT LFDMFGDDSS PKVKKFMNVI LSNLQETTTT 240
  241 IQTVSDEVLG SVENLAQEFL EQKLSDDVKP AIQDVYAGAI NGALPDNGIL ISGCQTDQTS 300
  301 SDASPPGHPE LAYGALTNAI QIIIGETKGK ISNKDLVLKA RKLLRKQGFD QRPGLYCNDA 360
  361 YVNARFIC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 6.221849 Crystal structure of human caspase-1 in complex with 3-(2-mercapto-acetylamino)-4-oxo-pentanoic acid
    2 View Details [158..368] FFAS03 1.0 Caspase-9

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.446816200197746 bayes_pls_golite062009
  • binding
    		•  0.128865592323915 bayes_pls_golite062009
  • hydrolase activity
    		•  0.00345801703057891 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle