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Protein Overview: CDT1B_ARATH

General Information:
Name(s) found: CDT1B_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA replication [IMP]
    chloroplast organization [IMP]
    Molecular Function: cyclin-dependent protein kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSKIDSE KPVMVSESLF STKTPIKTVK RQIFSSSPKP ESVIKLPERF EILEEFFNGL  60
   61 DTAIRLLKLK GSSTTYANIC PKIEYLTNRI FSYDHLAQMK HIYPEAIELK RVLKFVEDTC 120
  121 CMKPRLHIKL NTDAIVVEDT ICGTKYMELR KVFHSKLVDF RKAHPKDEIP KELLPEPFNS 180
  181 PQRDSYSGIV SVGLGEPKLE VGGFDVHMEE IEQEEQDVNK VIPDSTLSHI ESRIVETPVK 240
  241 DLSTPSKDLS TPIRLMSATP TLQLSKRCIE LTPEGGDDNS LRSTNSLARG PSRSLNFDTF 300
  301 EEDAIEKDDI GNESDDKGIN YEEDGLLQSV KGPSRSLNFD TLEEETIVKD DISNESGDEK 360
  361 SNYEGDNASD DDSLLQSMIE RPKTEPEKHN LPQLVNLIHR VFHSTNRTVI TKEELLYKII 420
  421 ANQINITDRR EVEEQLSLML QLVPDWISET KASSGDLLVR INKMSTAETV RARLEEATSH 480
  481 DISLIY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 30.30103 Strucure of Geminin-Cdt1 complex
    2 View Details [275..486] MSA 2.183993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle