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Protein Overview: CCT11_ARATH

General Information:
Name(s) found: CCT11_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75308884|sp|Q9C8P7.1|CCT11_ARATH RecName: Full=Putative cyclin-T1-1; Short=CycT1;1 [NCBI NR]
  • pir||E86475 hypothetical protein F12A4.13 - Arabidopsis thaliana [NCBI NR]
  • gi|15219592|ref|NP_174775.1| CYCT1;1 (CYCLIN T1;1); cyclin-dependent protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|12324285|gb|AAG52114.1|AC023064_7 hypothetical protein; 32762-33505 [Arabidopsis thaliana] [NCBI NR]
  • Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1 [Swiss-Prot]
  • (Q9C8P7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein; 32762-33505 [Arabidopsis thaliana]gi|25366902|pir||E86475 hypothetical protein F12A4.13 - Arabidopsis thalianagi|15219592|ref|NP_174775.1| cyclin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cyclin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CYCT1;1 | CYCT1;1; cyclin-dependent protein kinase | chr1:13035272-13036015 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein; 32762-33505 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cyclin-dependent protein kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CYCT1;1 | cyclin T1;1 | chr1:13035294-13036037 REVERSE LENGTH=247 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of cell cycle [ISS]
    Molecular Function: cyclin-dependent protein kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETKNWYNT REAIEKTSPS RLDGINLKEE TFQRWSYTSF LQELGQRLNN PQKTIATAIV  60
   61 LCQRFFTRQS LTKNDPKTVA IICMFIAGKV EGSPRPAGDV VFVSYRVLFN KEPLRDVFER 120
  121 LKMTVLTGEK LVLSTLECDL EIEHPYKLVM DWVKRSVKTE DGRRLCQAAF NFVNDSLRTS 180
  181 LCLQFGPSQI ASAAIYIGLS MCKMTLPCDG DKAWWREFDV TKRQLWEICD QMLDLYVQDF 240
  241 VVPRHGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 33.221849 No description for 2pk2A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
    		•  4.69539052135726 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.795846725429 bayes_pls_golite062009
  • binding
    		•  2.4204867358489 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.04886889839181 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
    		•  1.98373193969564 bayes_pls_golite062009
  • DNA binding
    		•  1.94297811210385 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  1.69725593301329 bayes_pls_golite062009
  • kinase regulator activity
    		•  1.65109787211976 bayes_pls_golite062009
  • protein binding
    		•  1.47106731485576 bayes_pls_golite062009
  • transcription factor activity
    		•  1.21921365719206 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.09952334871968 bayes_pls_golite062009
  • transcription factor binding
    		•  0.749278791251235 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.729629809946521 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.36347576272001 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.138191616709499 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0696060248241566 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle