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Protein Overview: gi|2245011, gi|1...

General Information:
Name(s) found: gi|7485133 [NCBI NR]
gi|7268405 [NCBI NR]
gi|2245011 [NCBI NR]
gi|15235783 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||E71432 hypothetical protein - Arabidopsis thaliana [NCBI NR]
  • gi|7268405|emb|CAB78697.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2245011|emb|CAB10431.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235783|ref|NP_193388.1| heat shock protein-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 743 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: proteolysis [IEA]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSPVTLAPP SPEGFYAINN PFLVNGPKGF LEAKTLDNES YIRFDLPGVP RDGVTVLLDQ  60
   61 PNNTVNILAD APKEHKYDSS HRNYDGTKLR PKISVGGINT KIPCKCCEFF SGFTSHMADG 120
  121 VLRLVLTTSH ASTRRPSCTC ISFLGGSDGE DRVGTATDGF PHATDPNDGY YATNNPYQVN 180
  181 GPKGFTEFKY LEETHDLFVR LDFPGIQKES VIILLEPSKK AVIVTGEAPK ESKHDSSHRK 240
  241 YGTATGLICD CCEISNIQCF VGDGVVRLIL SKQKINLRVP IFCSCKITNL QNVLFFCLIF 300
  301 VGGARMPTDA SPNIIRGYNP EDLSVELLLE TSLRCFSIVN VSDIFHGFVL LIPIVAVAGG 360
  361 HPLAHLRGLN PEGCRGTDPF DPAFTGPTIR PHPSVLEGST SAYETKQLSN GGLYLRIDMP 420
  421 GVPSDGFIVA VDGNGVVTIM GRAPATMHDS NGFYAMNNPY QANGPKGFAE FKYLEDTHDL 480
  481 FVRLDLPGVK KETVGFYAIN NQFQANGPKG FMEFKMLENE DMYVRIDFPG VPRDGVRVFL 540
  541 DQSKKAVCIF ADAPKEHKYD YSERNYGTST GLVCKCCEIS GFTSFMSDGV LRLLLTKSNI 600
  601 TPQRSSCISF LAGPDFREDL RGNGPHKFPH GTDPNDPKLT GRILMPHPCV NYGSEMAYES 660
  661 KQLQNGGLYV RVDMPGVPKE NFTVAVMNGR VRVTGEAPAI SHDSSGRFYT GDVAMLSTPF 720
  721 DIPIRKIKII AKNGVIRLII PPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] FFAS03 4.98 Small heat shock protein
    2 View Details [142..288] PSI-BLAST 26.522879 Small heat shock protein
    3 View Details [289..395] deduced N/A No confident structure predictions are available.
    4 View Details [396..743] PSI-BLAST 12.221849 CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle