| Protein: | gi|2245011, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 743 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2245011, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
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435.0 | [0..167] | [741..527] |
|
|
148.0 | [0..143] | [285..5] |
|
|
147.0 | [0..141] | [285..5] |
|
|
146.0 | [0..141] | [289..5] |
|
|
146.0 | [0..141] | [289..5] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MVSPVTLAPP SPEGFYAINN PFLVNGPKGF LEAKTLDNES YIRFDLPGVP RDGVTVLLDQ 60
61 PNNTVNILAD APKEHKYDSS HRNYDGTKLR PKISVGGINT KIPCKCCEFF SGFTSHMADG 120
121 VLRLVLTTSH ASTRRPSCTC I
|
| Detection Method: |  |
| Confidence: | 4.98 |
| Match: | 1shsA |
| Description: | Small heat shock protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [142-288] |
1 11 21 31 41 51
| | | | | |
1 SFLGGSDGED RVGTATDGFP HATDPNDGYY ATNNPYQVNG PKGFTEFKYL EETHDLFVRL 60
61 DFPGIQKESV IILLEPSKKA VIVTGEAPKE SKHDSSHRKY GTATGLICDC CEISNIQCFV 120
121 GDGVVRLILS KQKINLRVPI FCSCKIT
|
| Detection Method: | |
| Confidence: | 26.522879 |
| Match: | 1gmeA |
| Description: | Small heat shock protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [289-395] |
1 11 21 31 41 51
| | | | | |
1 NLQNVLFFCL IFVGGARMPT DASPNIIRGY NPEDLSVELL LETSLRCFSI VNVSDIFHGF 60
61 VLLIPIVAVA GGHPLAHLRG LNPEGCRGTD PFDPAFTGPT IRPHPSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [396-743] |
1 11 21 31 41 51
| | | | | |
1 LEGSTSAYET KQLSNGGLYL RIDMPGVPSD GFIVAVDGNG VVTIMGRAPA TMHDSNGFYA 60
61 MNNPYQANGP KGFAEFKYLE DTHDLFVRLD LPGVKKETVG FYAINNQFQA NGPKGFMEFK 120
121 MLENEDMYVR IDFPGVPRDG VRVFLDQSKK AVCIFADAPK EHKYDYSERN YGTSTGLVCK 180
181 CCEISGFTSF MSDGVLRLLL TKSNITPQRS SCISFLAGPD FREDLRGNGP HKFPHGTDPN 240
241 DPKLTGRILM PHPCVNYGSE MAYESKQLQN GGLYVRVDMP GVPKENFTVA VMNGRVRVTG 300
301 EAPAISHDSS GRFYTGDVAM LSTPFDIPIR KIKIIAKNGV IRLIIPPV
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 2bolA |
| Description: | CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN |
Matching Structure (courtesy of the PDB): |
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