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Protein Overview: gi|15219124, gi|...

General Information:
Name(s) found: gi|25405611 [NCBI NR]
gi|15219124 [NCBI NR]
gi|12324650 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||C96570 hypothetical protein F14G24.17 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219124|ref|NP_175698.1| disease resistance protein (TIR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12324650|gb|AAG52286.1|AC019018_23 hypothetical protein; 71988-71283 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 199 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRVFNFMK QSETVQLNNK LFLDLLSSSS SAKPKILHDV FINHRGSDTK RNIATLLYDN  60
   61 LKSRNLRPFL DSKNMKPGDK LFDHINNAIL TSKVAVTVFS PNYCDSYFCL HELALIMESR 120
  121 KRVIPIFCDI KPSQLDVMIE RVTCSDDEIQ RFRWALQEAK DIVGLTFDSY KGNLSEVVTV 180
  181 ASDVIVERLV ELEAKDENL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] PSI-BLAST 23.221849 Toll-like receptor 1, TLR1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.261666574457319 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle