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Protein Overview: gi|15234213, gi|...

General Information:
Name(s) found: gi|7268194 [NCBI NR]
gi|25407112 [NCBI NR]
gi|15234213 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|7268194|emb|CAB77721.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F85019 hypothetical protein AT4g01510 [imported] - Arabidopsis thaliana [NCBI NR]
  • ref|NP_192060.1| transmembrane ARV1-like family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    endoplasmic reticulum [IDA]
    Biological Process: sterol metabolic process [IMP]
    sphingolipid metabolic process [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVITRIKD PIEKERDNSH RHREMAREKK TCVECGHKVK SLFIQYSPGN FRLMKCENCE  60
   61 EVADEYVECE LLIIFIDLIL HKTKAYRHLL YNVVNQESAN VQHLLWKLVL AYLLLDTYRS 120
  121 LLLRRTNDGS NVSMSFLFES LEVLVNVLSA NFAFVFSFAF AAKLMLVMPR GKEILLTILI 180
  181 SSYVKIFLFA MPVWEFPVSV IFIVDMLVLT SNAVALKVMT ESATSRCLAV CFIAHSIRFL 240
  241 VDQISGHLGS VM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] FFAS03 0.951 Crystal structure of type I cytochrome c3 from Desulfovibrio africanus
    2 View Details [119..252] Pfam 23.045757 No description for PF04161.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle