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Protein Overview: APRR6_ARATH, PRR...

General Information:
Name(s) found: PRR6_ARATH [Swiss-Prot]
APRR6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|52783238|sp|Q9C9F6.1|APRR6_ARATH RecName: Full=Putative two-component response regulator-like APRR6; AltName: Full=Pseudo-response regulator 6 [NCBI NR]
  • pir||E96705 hypothetical protein T22E19.16 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221303|ref|NP_176988.1| APRR6 (PSEUDO-RESPONSE REGULATOR 6); transcription regulator [Arabidopsis thaliana] [NCBI NR]
  • gi|12325328|gb|AAG52609.1|AC016447_18 hypothetical protein; 77882-74563 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9F6) Putative two-component response regulator-like APRR6 (Pseudo-response regulator 6) [Swiss-Prot]
  • Putative two-component response regulator-like APRR6 OS=Arabidopsis thaliana GN=APRR6 PE=3 SV=1 [Swiss-Prot]
  • (Q9C9F6) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein T22E19.16 [imported] - Arabidopsis thalianagi|12325328|gb|AAG52609.1| hypothetical protein; 77882-74563 [Arabidopsis thaliana]gi|15221303|ref|NP_176988.1| two-component responsive regulator family protein / response regulator family [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative two-component response regulator-like APRR6 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PRR6, APRR6 | APRR6 (PSEUDO-RESPONSE REGULATOR 6); transcription regulator | chr1:25569646-25572965 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • APRR6 (PSEUDO-RESPONSE REGULATOR 6); transcription regulator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein; 77882-74563 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative two-component response regulator-like APRR6 (Pseudo-response regulator 6) [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 663 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: two-component signal transduction system (phosphorelay) [IEA]
    regulation of transcription, DNA-dependent [IEA]
    regulation of transcription [IEA]
    Molecular Function: transcription regulator activity [TAS]
    two-component response regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGCLVPECA DDISILLIDH DTASIASLTS MLQQFSKRVM SVDVASKALS MIEKQKKEIG  60
   61 LIIANIEMPH IDSHSFLNAL LLKDIPLILI NPEIKTKEPS DLLTKRACFS LDKPISNDDI 120
  121 KNMWQHVFSK KSQELKKINI TEDQENVMDK DTYQIEAFRA NLKRQRISQA SLLGRRPFID 180
  181 TFSTYETFQK RKSIANVEWK TTPSYAIEIE NKRKEWKKSV GRRKSLWNSE RHMKFIAAIS 240
  241 ILGEEVLFKK PIGEKEETMP KFHIGGKLDL SNHSVHGNVL NKLSMNVNFV PSTISNNPAY 300
  301 NILSIDSSSI DSSSYTGLVS TGLSSENSPI LYGLPSNDGA SNTCTSQMES ERISIPQYDP 360
  361 NQCHPHRSIL ETDVNQIDLD FTSILDSFDP LVDECLMKEN NRFLPNPTMN LLDTDIDKMD 420
  421 WVSFIENLSH HDINMNHMDW DPSTANYVLP ETNMNINFPE KHTNEIGWVS SQVGYVPFEN 480
  481 MIPSEVDINH MGMGYSGGSI PPQEETNTNN VGFVSCEIHS EIPPKTNMAI LETNYSNPLD 540
  541 WVFPEDITSL ETNTIQKSLV SCETSYDALD NMVPLETNME EMNDALYDIS IEDLISFDID 600
  601 ANEKDIFSWL EDNGFSEENN MMESCEYHNI ESVNQSDDMK IDDNFDDYRE CMDWINEEMN 660
  661 KDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..432] PSI-BLAST 56.522879 Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
    2 View Details [433..663] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.07885074402355 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.07885074402355 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.53373140048441 bayes_pls_golite062009
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle