| Protein: | APRR6_ARATH, PRR... |
| Organism: | Arabidopsis thaliana |
| Length: | 663 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APRR6_ARATH, PRR....
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..10] | [474..2] |
|
Region A: Residues: [1-432] |
1 11 21 31 41 51
| | | | | |
1 MAGCLVPECA DDISILLIDH DTASIASLTS MLQQFSKRVM SVDVASKALS MIEKQKKEIG 60
61 LIIANIEMPH IDSHSFLNAL LLKDIPLILI NPEIKTKEPS DLLTKRACFS LDKPISNDDI 120
121 KNMWQHVFSK KSQELKKINI TEDQENVMDK DTYQIEAFRA NLKRQRISQA SLLGRRPFID 180
181 TFSTYETFQK RKSIANVEWK TTPSYAIEIE NKRKEWKKSV GRRKSLWNSE RHMKFIAAIS 240
241 ILGEEVLFKK PIGEKEETMP KFHIGGKLDL SNHSVHGNVL NKLSMNVNFV PSTISNNPAY 300
301 NILSIDSSSI DSSSYTGLVS TGLSSENSPI LYGLPSNDGA SNTCTSQMES ERISIPQYDP 360
361 NQCHPHRSIL ETDVNQIDLD FTSILDSFDP LVDECLMKEN NRFLPNPTMN LLDTDIDKMD 420
421 WVSFIENLSH HD
|
| Detection Method: |  |
| Confidence: | 56.522879 |
| Match: | 1ny5A |
| Description: | Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| molecular transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| two-component response regulator activity | 1.53373140048441 | bayes_pls_golite062009 |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
|
Region A: Residues: [433-663] |
1 11 21 31 41 51
| | | | | |
1 INMNHMDWDP STANYVLPET NMNINFPEKH TNEIGWVSSQ VGYVPFENMI PSEVDINHMG 60
61 MGYSGGSIPP QEETNTNNVG FVSCEIHSEI PPKTNMAILE TNYSNPLDWV FPEDITSLET 120
121 NTIQKSLVSC ETSYDALDNM VPLETNMEEM NDALYDISIE DLISFDIDAN EKDIFSWLED 180
181 NGFSEENNMM ESCEYHNIES VNQSDDMKID DNFDDYRECM DWINEEMNKD V
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
