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Protein Overview: gi|3850579, gi|1...

General Information:
Name(s) found: gi|3850579 [NCBI NR]
gi|25296172 [NCBI NR]
gi|16323420 [NCBI NR]
gi|15218740 [NCBI NR]
gi|14334706 [NCBI NR]
gi|13272443 [NCBI NR]
Description(s) found:
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  • gi|3850579|gb|AAC72119.1| Strong similarity to gb|D14550 extracellular dermal glycoprotein (EDGP) precursor from Daucus carota. ESTs gb|H37281, gb|T44167, gb|T21813, gb|N38437, gb|Z26470, gb|R65072, gb|N76373, gb|F15470, gb|Z35182, gb|H76373, gb|Z34678 a [NCBI NR]
  • pir||F86163 hypothetical protein F15K9.17 - Arabidopsis thaliana [NCBI NR]
  • gi|16323420|gb|AAL15204.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15218740|ref|NP_171821.1| extracellular dermal glycoprotein, putative / EDGP, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|14334706|gb|AAK59531.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13272443|gb|AAK17160.1|AF325092_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZVS4) F15K9.17 protein (Hypothetical protein) (Putative extracellular dermal glycoprotein EDGP) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|14334706|gb|AAK59531.1| unknown protein [Arabidopsis thaliana]gi|3850579|gb|AAC72119.1| Strong similarity to gb|D14550 extracellular dermal glycoprotein (EDGP) precursor from Daucus carota. ESTs gb|H37281, gb|T4 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Extracellular dermal glycoprotein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | extracellular dermal glycoprotein, putative / EDGP, putative | chr1:787143-788444 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Strong similarity to gb|D14550 extracellular dermal glycoprotein (EDGP) precursor from Daucus carota. ESTs gb|H37281, gb|T44167, gb|T21813, gb|N38437, gb|Z26470, gb|R65072, gb|N76373, gb|F15470, gb|Z35182, gb|H76373, gb|Z34678 and gb|Z35387 come from thi [nr-271106-contam.fasta]
  • | Symbols: | Eukaryotic aspartyl protease family protein | chr1:787143-788444 FORWARD LENGTH=433 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Aspartyl protease-like protein OS=Arabidopsis thaliana GN=F15K9.17 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    membrane [IDA]
    plant-type cell wall [IDA]
    plasma membrane [IDA]
    Biological Process: response to salt stress [IEP]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV  60
   61 FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG TCFSPPRPGC SNNTCGGIPD 120
  121 NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG 180
  181 RHNIGLPSQF AAAFSFHRKF AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS 240
  241 TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS 300
  301 IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR 360
  361 IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN LIEFDLASNK FGFSSTLLGR 420
  421 QTNCANFNFT STA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] PSI-BLAST 32.0 Crystal Structure of the Triticum aestivum xylanase inhibitor I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle