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View Structure Prediction Details

Protein: gi|3850579, gi|1...
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3850579, gi|1....

Description E-value Query
Range
Subject
Range
gi|28603726, gi|... - gi|6224887|gb|AAF05998.1|AF192332_1 pregnancy-associated glycoprotein-15 [Bos taurus], gi|28603726|r...
280.0 [0..22] [417..49]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV  60
   61 FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG TCFSPPRPGC SNNTCGGIPD 120
  121 NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG 180
  181 RHNIGLPSQF AAAFSFHRKF AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS 240
  241 TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS 300
  301 IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR 360
  361 IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN LIEFDLASNK FGFSSTLLGR 420
  421 QTNCANFNFT STA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 1t6eX
Description: Crystal Structure of the Triticum aestivum xylanase inhibitor I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.01508543827677 bayes_pls_golite062009
hydrolase activity 0.77554493777157 bayes_pls_golite062009
peptidase activity 0.68518523369811 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.43925265235199 bayes_pls_golite062009
endopeptidase activity 0.43264884039584 bayes_pls_golite062009
aspartic-type endopeptidase activity 0.30585066730542 bayes_pls_golite062009
aspartic-type peptidase activity 0.30585066730542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle